Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_M06
(891 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 3.7
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 3.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.7
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 3.7
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 6.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 6.5
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 22 8.6
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 8.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 8.6
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 22 8.6
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 22 8.6
AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family p... 22 8.6
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 178 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLK 41
R R PS I LF++ L K+I IL GN R K
Sbjct: 284 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAK 329
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 178 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLK 41
R R PS I LF++ L K+I IL GN R K
Sbjct: 284 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAK 329
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 178 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLK 41
R R PS I LF++ L K+I IL GN R K
Sbjct: 284 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAK 329
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 178 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLK 41
R R PS I LF++ L K+I IL GN R K
Sbjct: 284 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAK 329
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 178 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLK 41
R R PS I LF++ L K+I IL GN R K
Sbjct: 284 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAK 329
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 178 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLK 41
R R PS I LF++ L K+I IL GN R K
Sbjct: 284 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAK 329
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 519 IFKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 626
++KN I E + Y P P+G WI+++E
Sbjct: 116 LYKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 151
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 519 IFKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 626
++KN I E + Y P P+G WI+++E
Sbjct: 116 LYKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 151
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 178 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLK 41
R R PS I LF++ L K+I IL GN R K
Sbjct: 352 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAK 397
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -3
Query: 178 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLK 41
R R PS I LF++ L K+I IL GN R K
Sbjct: 352 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAK 397
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.0 bits (47), Expect = 3.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 133 FIESCMMLANKFTKTKRI*IPPILSGN 53
F E CM L K +T+ +P ILS N
Sbjct: 212 FTELCMKLGWKSARTRFDILPLILSAN 238
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 504 PQPAQ*SQALCKCSSRVHYTCNI 436
PQP +AL KC +R TCN+
Sbjct: 701 PQPI--GKALSKCHNRNVTTCNM 721
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 522 FKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 626
+KN I E + Y P P+G WI+++E
Sbjct: 117 YKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 151
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 522 FKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 626
+KN I E + Y P P+G WI+++E
Sbjct: 342 YKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 376
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 312 NDKIRCFFEEGAIDADGN 365
N+ +C +EG A+GN
Sbjct: 45 NNYFKCLMDEGRCTAEGN 62
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.8 bits (44), Expect = 8.6
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 522 FKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 626
+KN I E + Y P P+G WI+++E
Sbjct: 106 YKNYIINIEQIPVPVPIYCGNFPPRPMGPWISIQE 140
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 8.6
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 522 FKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 626
+KN I E + Y P P+G WI+++E
Sbjct: 347 YKNYIINIEQIPVPVPIYCGNFPPRPMGPWISIQE 381
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 312 NDKIRCFFEEGAIDADGN 365
N+ +C +EG A+GN
Sbjct: 45 NNYFKCLMDEGRCTAEGN 62
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 312 NDKIRCFFEEGAIDADGN 365
N+ +C +EG A+GN
Sbjct: 45 NNYFKCLMDEGRCTAEGN 62
>AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family
protein protein.
Length = 166
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 766 SSFTPIPVSKGPCILLHG 819
++ TP + + PC+LL+G
Sbjct: 16 TALTPSTLGRFPCLLLNG 33
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,407
Number of Sequences: 438
Number of extensions: 5762
Number of successful extensions: 30
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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