Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_M05
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0951 - 21769342-21769752                                         75   8e-14
02_02_0470 - 10700092-10700505                                         74   1e-13
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224...    30   3.0  
04_03_0904 + 20717005-20718087                                         29   3.9  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   6.8  
02_05_1258 + 35290183-35290198,35290292-35290599,35290844-352909...    29   6.8  
01_02_0007 + 10132380-10133201                                         28   9.0  

>10_08_0951 - 21769342-21769752
          Length = 136

 Score = 74.9 bits (176), Expect = 8e-14
 Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = +2

Query: 194 KPYGXAFVAGIDXYPRKVXKXMGXXKXHKRSXIKPFVKVVXYNHLMPTRYTVDFXFEKFS 373
           +PYG   VAG+  YP+KV +     K  K+S +K F+K+V + HLMPTRYT+D   ++ +
Sbjct: 36  RPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRVKCFLKLVNFTHLMPTRYTLDVDLKEVA 95

Query: 374 A--KDLXDPAKRKXLRFNTRVRFEEXXXXGXXXWFLQKLRF 490
           A    L    K+     + + R E+    G   WF  KLRF
Sbjct: 96  AGPDALATRDKKVAACKSAKARLEDRFKTGKNRWFFTKLRF 136



 Score = 35.1 bits (77), Expect = 0.079
 Identities = 13/30 (43%), Positives = 22/30 (73%)
 Frame = +1

Query: 121 LVLSGRYAGRKAIVVKNYDEGTSXQAVRAC 210
           ++L GR+AGRKA++V+ ++EGT  +    C
Sbjct: 12  ILLQGRFAGRKAVIVRVFEEGTRDRPYGHC 41


>02_02_0470 - 10700092-10700505
          Length = 137

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
 Frame = +2

Query: 194 KPYGXAFVAGIDXYPRKVXKXMGXXKXHKRSXIKPFVKVVXYNHLMPTRYTVDFXFEKFS 373
           +PYG   VAG+  YP+KV +     K  K+S +K F+K+V + H+MPTRYT+D  F+  +
Sbjct: 36  RPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRVKCFLKLVNFTHIMPTRYTLDVDFKDVA 95

Query: 374 A--KDLXDPAKRKXLRFN-TRVRFEEXXXXGXXXWFLQKLRF 490
           +   D      +K       + R EE    G   WF  KLRF
Sbjct: 96  SGGPDALATRDKKVAACKAAKARLEERFKTGKNRWFFTKLRF 137



 Score = 36.7 bits (81), Expect = 0.026
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = +1

Query: 121 LVLSGRYAGRKAIVVKNYDEGTSXQAVRAC 210
           ++L GRYAGRKA++V+ ++EGT  +    C
Sbjct: 12  ILLQGRYAGRKAVIVRVFEEGTRDRPYGHC 41


>01_07_0239 +
           42222024-42222133,42222220-42222301,42222396-42222486,
           42222702-42222814,42222912-42222984,42223080-42223178,
           42223201-42223406,42223693-42223832,42223912-42223969,
           42224067-42224137,42224207-42224741
          Length = 525

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -3

Query: 917 GGGXXSX*XRERGXGPXRXAGGARGXGXGXRDGG 816
           GGG  S    ++G GP    GG  G   G R GG
Sbjct: 449 GGGYGSGPYPQQGRGPPPYPGGGMGGAGGPRGGG 482


>04_03_0904 + 20717005-20718087
          Length = 360

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = +1

Query: 808 TXFPPSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPP 915
           T  PPS  P P P  PP  +  P P         PP
Sbjct: 212 TPTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPAPP 247



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +1

Query: 808 TXFPPSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPPP 918
           T  PP+  P P P  PP  +  P P    +     PP
Sbjct: 140 TPTPPTYKPQPKPTPPPTYKPQPKPTPTPYTPTPTPP 176


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = +1

Query: 817 PPSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPPP 918
           PP   P P P+ PP     P P         PPP
Sbjct: 293 PPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPP 326


>02_05_1258 +
           35290183-35290198,35290292-35290599,35290844-35290939,
           35291067-35291144,35291224-35291400,35292738-35292806,
           35292917-35293093
          Length = 306

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 884 RGXGPXRXAGGARGXGXGXRDGGK 813
           RG G  R  GG RG G G   GG+
Sbjct: 14  RGDGGGRSGGGGRGFGRGGDSGGR 37


>01_02_0007 + 10132380-10133201
          Length = 273

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +1

Query: 820 PSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPPP 918
           P   P P P APP     P P S    L  P P
Sbjct: 196 PQPLPQPDPNAPPQPLPQPDPNSPPQPLPQPDP 228


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,549,026
Number of Sequences: 37544
Number of extensions: 278465
Number of successful extensions: 2084
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1981
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)