Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_M05
(919 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 107 7e-23
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 107 7e-23
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 107 7e-23
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 107 7e-23
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 107 7e-23
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 107 7e-23
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 107 7e-23
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 107 7e-23
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 107 7e-23
U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27 pro... 38 0.051
BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein. 33 1.9
BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif prote... 33 1.9
AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif prote... 33 1.9
AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif prote... 33 1.9
AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif prote... 33 1.9
AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif prote... 33 1.9
AK027456-1|BAB55125.1| 680|Homo sapiens protein ( Homo sapiens ... 33 1.9
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 32 3.4
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 32 3.4
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 32 3.4
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 32 3.4
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 32 3.4
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 107 bits (256), Expect = 7e-23
Identities = 55/101 (54%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Frame = +2
Query: 194 KPYGXAFVAGIDXYPRKVXKXMGXXKXHKRSXIKPFVKVVXYNHLMPTRYTVDFXFEKFS 373
+PY A VAGID YPRKV MG K KRS IK FVKV YNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 374 A-KDL-XDPAKRKXLRFNTRVRFEEXXXXGXXXWFLQKLRF 490
KD+ DPA ++ R +V+FEE G WF QKLRF
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/23 (73%), Positives = 22/23 (95%)
Frame = +1
Query: 121 LVLSGRYAGRKAIVVKNYDEGTS 189
LVL+GRY+GRKA++VKN D+GTS
Sbjct: 12 LVLAGRYSGRKAVIVKNIDDGTS 34
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 107 bits (256), Expect = 7e-23
Identities = 55/101 (54%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Frame = +2
Query: 194 KPYGXAFVAGIDXYPRKVXKXMGXXKXHKRSXIKPFVKVVXYNHLMPTRYTVDFXFEKFS 373
+PY A VAGID YPRKV MG K KRS IK FVKV YNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 374 A-KDL-XDPAKRKXLRFNTRVRFEEXXXXGXXXWFLQKLRF 490
KD+ DPA ++ R +V+FEE G WF QKLRF
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/23 (73%), Positives = 22/23 (95%)
Frame = +1
Query: 121 LVLSGRYAGRKAIVVKNYDEGTS 189
LVL+GRY+GRKA++VKN D+GTS
Sbjct: 12 LVLAGRYSGRKAVIVKNIDDGTS 34
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 107 bits (256), Expect = 7e-23
Identities = 55/101 (54%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Frame = +2
Query: 194 KPYGXAFVAGIDXYPRKVXKXMGXXKXHKRSXIKPFVKVVXYNHLMPTRYTVDFXFEKFS 373
+PY A VAGID YPRKV MG K KRS IK FVKV YNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 374 A-KDL-XDPAKRKXLRFNTRVRFEEXXXXGXXXWFLQKLRF 490
KD+ DPA ++ R +V+FEE G WF QKLRF
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/23 (73%), Positives = 22/23 (95%)
Frame = +1
Query: 121 LVLSGRYAGRKAIVVKNYDEGTS 189
LVL+GRY+GRKA++VKN D+GTS
Sbjct: 12 LVLAGRYSGRKAVIVKNIDDGTS 34
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 107 bits (256), Expect = 7e-23
Identities = 55/101 (54%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Frame = +2
Query: 194 KPYGXAFVAGIDXYPRKVXKXMGXXKXHKRSXIKPFVKVVXYNHLMPTRYTVDFXFEKFS 373
+PY A VAGID YPRKV MG K KRS IK FVKV YNHLMPTRY+VD +K
Sbjct: 40 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 99
Query: 374 A-KDL-XDPAKRKXLRFNTRVRFEEXXXXGXXXWFLQKLRF 490
KD+ DPA ++ R +V+FEE G WF QKLRF
Sbjct: 100 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 140
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/23 (73%), Positives = 22/23 (95%)
Frame = +1
Query: 121 LVLSGRYAGRKAIVVKNYDEGTS 189
LVL+GRY+GRKA++VKN D+GTS
Sbjct: 16 LVLAGRYSGRKAVIVKNIDDGTS 38
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 107 bits (256), Expect = 7e-23
Identities = 55/101 (54%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Frame = +2
Query: 194 KPYGXAFVAGIDXYPRKVXKXMGXXKXHKRSXIKPFVKVVXYNHLMPTRYTVDFXFEKFS 373
+PY A VAGID YPRKV MG K KRS IK FVKV YNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 374 A-KDL-XDPAKRKXLRFNTRVRFEEXXXXGXXXWFLQKLRF 490
KD+ DPA ++ R +V+FEE G WF QKLRF
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/23 (73%), Positives = 22/23 (95%)
Frame = +1
Query: 121 LVLSGRYAGRKAIVVKNYDEGTS 189
LVL+GRY+GRKA++VKN D+GTS
Sbjct: 12 LVLAGRYSGRKAVIVKNIDDGTS 34
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 107 bits (256), Expect = 7e-23
Identities = 55/101 (54%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Frame = +2
Query: 194 KPYGXAFVAGIDXYPRKVXKXMGXXKXHKRSXIKPFVKVVXYNHLMPTRYTVDFXFEKFS 373
+PY A VAGID YPRKV MG K KRS IK FVKV YNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 374 A-KDL-XDPAKRKXLRFNTRVRFEEXXXXGXXXWFLQKLRF 490
KD+ DPA ++ R +V+FEE G WF QKLRF
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/23 (73%), Positives = 22/23 (95%)
Frame = +1
Query: 121 LVLSGRYAGRKAIVVKNYDEGTS 189
LVL+GRY+GRKA++VKN D+GTS
Sbjct: 12 LVLAGRYSGRKAVIVKNIDDGTS 34
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 107 bits (256), Expect = 7e-23
Identities = 55/101 (54%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Frame = +2
Query: 194 KPYGXAFVAGIDXYPRKVXKXMGXXKXHKRSXIKPFVKVVXYNHLMPTRYTVDFXFEKFS 373
+PY A VAGID YPRKV MG K KRS IK FVKV YNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 374 A-KDL-XDPAKRKXLRFNTRVRFEEXXXXGXXXWFLQKLRF 490
KD+ DPA ++ R +V+FEE G WF QKLRF
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/23 (73%), Positives = 22/23 (95%)
Frame = +1
Query: 121 LVLSGRYAGRKAIVVKNYDEGTS 189
LVL+GRY+GRKA++VKN D+GTS
Sbjct: 12 LVLAGRYSGRKAVIVKNIDDGTS 34
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 107 bits (256), Expect = 7e-23
Identities = 55/101 (54%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Frame = +2
Query: 194 KPYGXAFVAGIDXYPRKVXKXMGXXKXHKRSXIKPFVKVVXYNHLMPTRYTVDFXFEKFS 373
+PY A VAGID YPRKV MG K KRS IK FVKV YNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 374 A-KDL-XDPAKRKXLRFNTRVRFEEXXXXGXXXWFLQKLRF 490
KD+ DPA ++ R +V+FEE G WF QKLRF
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/23 (73%), Positives = 22/23 (95%)
Frame = +1
Query: 121 LVLSGRYAGRKAIVVKNYDEGTS 189
LVL+GRY+GRKA++VKN D+GTS
Sbjct: 12 LVLAGRYSGRKAVIVKNIDDGTS 34
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 107 bits (256), Expect = 7e-23
Identities = 55/101 (54%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Frame = +2
Query: 194 KPYGXAFVAGIDXYPRKVXKXMGXXKXHKRSXIKPFVKVVXYNHLMPTRYTVDFXFEKFS 373
+PY A VAGID YPRKV MG K KRS IK FVKV YNHLMPTRY+VD +K
Sbjct: 36 RPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTV 95
Query: 374 A-KDL-XDPAKRKXLRFNTRVRFEEXXXXGXXXWFLQKLRF 490
KD+ DPA ++ R +V+FEE G WF QKLRF
Sbjct: 96 VNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/23 (73%), Positives = 22/23 (95%)
Frame = +1
Query: 121 LVLSGRYAGRKAIVVKNYDEGTS 189
LVL+GRY+GRKA++VKN D+GTS
Sbjct: 12 LVLAGRYSGRKAVIVKNIDDGTS 34
>U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27
protein.
Length = 40
Score = 37.9 bits (84), Expect = 0.051
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 389 DPAKRKXLRFNTRVRFEEXXXXGXXXWFLQKLRF 490
DPA ++ R +V+FEE G WF QKLRF
Sbjct: 7 DPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 40
>BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein.
Length = 983
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 817 PPSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPPP 918
PP L P P PP GP P SL PPP
Sbjct: 350 PPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPP 383
>BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 817 PPSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPPP 918
PP L P P PP GP P SL PPP
Sbjct: 350 PPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPP 383
>AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 817 PPSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPPP 918
PP L P P PP GP P SL PPP
Sbjct: 350 PPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPP 383
>AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 817 PPSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPPP 918
PP L P P PP GP P SL PPP
Sbjct: 351 PPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPP 384
>AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 817 PPSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPPP 918
PP L P P PP GP P SL PPP
Sbjct: 350 PPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPP 383
>AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 817 PPSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPPP 918
PP L P P PP GP P SL PPP
Sbjct: 351 PPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPP 384
>AK027456-1|BAB55125.1| 680|Homo sapiens protein ( Homo sapiens
cDNA FLJ14550 fis, clone NT2RM2001696. ).
Length = 680
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 817 PPSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPPP 918
PP L P P PP GP P SL PPP
Sbjct: 47 PPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPP 80
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 817 PPSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPPP 918
PP P P P PP GP PR L P P
Sbjct: 463 PPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAP 496
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 817 PPSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPPP 918
PP P P P PP GP PR L P P
Sbjct: 222 PPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAP 255
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 817 PPSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPPP 918
PP P P P PP GP PR L P P
Sbjct: 463 PPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAP 496
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 817 PPSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPPP 918
PP P P P PP GP PR L P P
Sbjct: 463 PPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAP 496
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 817 PPSLXPXPXPRAPPAXRXGPXPRSLXHXLXXPPP 918
PP P P P PP GP PR L P P
Sbjct: 463 PPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAP 496
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,411,945
Number of Sequences: 237096
Number of extensions: 1343271
Number of successful extensions: 9370
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9055
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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