Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_M04
         (896 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.44 
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    24   7.2  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    24   7.2  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    23   9.5  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    23   9.5  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    23   9.5  
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    23   9.5  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    23   9.5  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 27.9 bits (59), Expect = 0.44
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +3

Query: 432 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVWKT 569
           Q  +Q+   + Q  +  + QQ C +  Q+Q QQ+ L +   ++W T
Sbjct: 192 QQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQQLQQPQQQLWTT 237



 Score = 25.4 bits (53), Expect = 2.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 432 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYP 554
           Q  +Q+   RPQ  RP + +    R  QR+  +  L+EV P
Sbjct: 463 QQPQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPELIEVSP 503



 Score = 24.6 bits (51), Expect = 4.1
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +3

Query: 432 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVWKTTEFTSRSCP 596
           Q  +Q  P R Q      P+    +  Q+Q+QQ+   +    +W T     RSCP
Sbjct: 377 QQPRQSLPHRKQTQLQLSPRLQQQQQQQQQSQQQQQQQPQQLLWTT---VVRSCP 428


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 506 VTPKTKPARKSPGSLPPCLENNRVYFKIMSTEDKQYLKLD 625
           VTP T+PA K   + PP  + + + +    T+  +Y   D
Sbjct: 81  VTPNTEPASKPSPNCPPEYDPDHMVYIPHETDCGKYYICD 120


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 506 VTPKTKPARKSPGSLPPCLENNRVYFKIMSTEDKQYLKLD 625
           VTP T+PA K   + PP  + + + +    T+  +Y   D
Sbjct: 81  VTPNTEPASKPSPNCPPEYDPDHMVYIPHETDCGKYYICD 120


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 506 VTPKTKPARKSPGSLPPCLENNRVYFKIMSTEDKQYLKLD 625
           VTP T+PA K   + PP  + + + +    T+  +Y   D
Sbjct: 81  VTPNTEPAPKPSPNCPPEYDPDHMVYIPHETDCGKYYICD 120


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 506 VTPKTKPARKSPGSLPPCLENNRVYFKIMSTEDKQYLKLD 625
           VTP T+PA K   + PP  + + + +    T+  +Y   D
Sbjct: 81  VTPNTEPAPKPSPNCPPEYDPDHMVYIPHETDCGKYYICD 120


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 506 VTPKTKPARKSPGSLPPCLENNRVYFKIMSTEDKQYLKLD 625
           VTP T+PA K   + PP  + + + +    T+  +Y   D
Sbjct: 81  VTPNTEPAPKPSPNCPPEYDPDHMVYIPHETDCGKYYICD 120


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 506 VTPKTKPARKSPGSLPPCLENNRVYFKIMSTEDKQYLKLD 625
           VTP T+PA K   + PP  + + + +    T+  +Y   D
Sbjct: 81  VTPNTEPAPKPSPNCPPEYDPDHMVYIPHETDCGKYYICD 120


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 506 VTPKTKPARKSPGSLPPCLENNRVYFKIMSTEDKQYLKLD 625
           VTP T+PA K   + PP  + + + +    T+  +Y   D
Sbjct: 81  VTPNTEPAPKPSPNCPPEYDPDHMVYIPHETDCGKYYICD 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,780
Number of Sequences: 2352
Number of extensions: 14855
Number of successful extensions: 40
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)