Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_M02
(883 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 188 2e-46
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-13
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 73 7e-12
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 69 1e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 61 4e-08
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 60 7e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 53 8e-06
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 44 0.004
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 40 0.063
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 40 0.084
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 38 0.34
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 36 1.4
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 3.2
UniRef50_Q2SKV3 Cluster: Transcriptional regulator containing a ... 33 7.3
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 188 bits (457), Expect = 2e-46
Identities = 84/88 (95%), Positives = 84/88 (95%)
Frame = +3
Query: 552 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH 731
TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH 83
Query: 732 AVGISVRCRSXAPSWAVCTNPPFXPXXA 815
AVGISVRCRS APSWAVCTNPPF P A
Sbjct: 84 AVGISVRCRSFAPSWAVCTNPPFSPTAA 111
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +2
Query: 644 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 754
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 73.3 bits (172), Expect = 7e-12
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +3
Query: 552 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 665
TSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/42 (78%), Positives = 34/42 (80%)
Frame = +3
Query: 552 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 677
TSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +1
Query: 328 VCVLGALPLPRSLTRCARSFGCGERYQLT 414
+C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 30 ICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 69.3 bits (162), Expect = 1e-10
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = -3
Query: 806 RXERGVRAHSPAWSXRPTPN*DTYSVSYEKAPRFPKGERRTGIR*AAGSEQESARGSFQG 627
R ERGVRA+SPAWS RP P+ DT SVSYEKAPRFPKG++ + +G Q R + +G
Sbjct: 23 RAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV---SGKRQGRNRRAHEG 79
Score = 51.6 bits (118), Expect = 3e-05
Identities = 34/91 (37%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = -1
Query: 847 GWTQDDSTG*G-AXXGXNGGFVHTAQLGAXDLHRTEIPTA*AMRKRHASRREKGGQVSGK 671
GWTQDDS G + G ++ + + + + +K QVSGK
Sbjct: 9 GWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGK 68
Query: 670 RQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 578
RQGRNRRAHEGA+ K SL PPLT
Sbjct: 69 RQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 60.9 bits (141), Expect = 4e-08
Identities = 37/57 (64%), Positives = 38/57 (66%)
Frame = -2
Query: 549 RGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIXLILWITVLPPLSELIPLAAAERP 379
RGAEPMEKR + L V LL CS L LILWITVLPPLSEL PLAA ERP
Sbjct: 4 RGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 60.1 bits (139), Expect = 7e-08
Identities = 35/79 (44%), Positives = 37/79 (46%)
Frame = +3
Query: 579 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 758
VR GETRQD K P P PPFSL + + GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 759 SXAPSWAVCTNPPFXPXXA 815
S APSWAV NPPF P A
Sbjct: 83 SFAPSWAVSKNPPFSPTAA 101
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 53.2 bits (122), Expect = 8e-06
Identities = 30/54 (55%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 292 CINESANARGXAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 450
CI + A AR AV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 44.4 bits (100), Expect = 0.004
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -3
Query: 806 RXERGVRAHSPAWSXRPTPN 747
R ERGVRAHSPAWS RPTPN
Sbjct: 23 RAERGVRAHSPAWSERPTPN 42
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 42.3 bits (95), Expect = 0.016
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 516 VAGVFXXXXXXXTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 665
++ +F T+ITKI Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.3 bits (90), Expect = 0.063
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +2
Query: 218 INKLTTTIAFILCFRFRXXVWXVFSALMNRPTRGEXRFAYW 340
+++LT L RF V +ALMNRPTRGE RFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 39.9 bits (89), Expect = 0.084
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 806 RXERGVRAHSPAWSXRPTPN*DT 738
R ERGV A+SPAWS RPTP+ DT
Sbjct: 23 RAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.9 bits (84), Expect = 0.34
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -3
Query: 362 ERGSGRAPNTQTAXPRALADSLMQ 291
+R + APNTQTA PRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 35.9 bits (79), Expect = 1.4
Identities = 19/32 (59%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 782 VHEPPVXPXRCALSGTIVL-SPXGKXXLSPLA 874
+HEPPV P RCALSG L S + LSPLA
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSPLA 32
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 3.2
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -1
Query: 724 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 620
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_Q2SKV3 Cluster: Transcriptional regulator containing a
DNA-binding HTH domain and an aminotransferase domain
(MocR family) and their eukaryotic orthologs; n=1;
Hahella chejuensis KCTC 2396|Rep: Transcriptional
regulator containing a DNA-binding HTH domain and an
aminotransferase domain (MocR family) and their
eukaryotic orthologs - Hahella chejuensis (strain KCTC
2396)
Length = 498
Score = 33.5 bits (73), Expect = 7.3
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -1
Query: 724 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*ASIFVMLVQG 545
MRKR+A R++ R+G EG + G LV S PL+ S F+ VQ
Sbjct: 395 MRKRYAMRQQTLATALQPREGDVEILVEGDNAGLHLV---CWMPSLPLSAVSTFIEQVQT 451
Query: 544 GGAYGKTPATRPFY-GSWPFAGLLL 473
G + PFY G P AGLLL
Sbjct: 452 QGV--RVYPIHPFYHGEPPAAGLLL 474
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,671,308
Number of Sequences: 1657284
Number of extensions: 13656835
Number of successful extensions: 38648
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 36656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38595
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -