Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_M01
         (857 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB prot...    32   0.019
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.0  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   9.0  

>AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB
           protein.
          Length = 60

 Score = 32.3 bits (70), Expect = 0.019
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = +3

Query: 198 PRWKLFKKIEKVGRXVRDGLIKAGPAIA 281
           PRWK  K++EK+GR V     KA P IA
Sbjct: 27  PRWKFGKRLEKLGRNVFRAAKKALPVIA 54


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 355 CFKLXASLVLYHEVYFPKDFACPM 284
           C K+   +  ++ V+FP  F CP+
Sbjct: 505 CGKVVTHIRNHYHVHFPGRFECPL 528


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -1

Query: 230 FLNFLEEFPPGLRSSADRAESQHQREDEAQNTYEIHF 120
           F + + + P G+R + +R E + QR   A     +H+
Sbjct: 304 FDSIITDPPYGIREATERIEFKTQRRATAMTEDAVHY 340


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,145
Number of Sequences: 2352
Number of extensions: 7709
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)