Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_L24
         (898 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr...    29   6.0  
U29381-7|AAA68755.1|  225|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical
           protein F54D1.6 protein.
          Length = 1423

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 547 PYEAYPQYFVNMEVTNKMDYVKMMDGCL 630
           P   YP+ F N E+T  MD V+M D  L
Sbjct: 476 PLVWYPRNFTNPEMTQHMDQVRMNDDTL 503


>U29381-7|AAA68755.1|  225|Caenorhabditis elegans Hypothetical
           protein F35D11.9 protein.
          Length = 225

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +3

Query: 717 YPNNEDRIAY-LTEDVG-LNAYYYYFHSXLPFWWXSGNTELSG 839
           Y + ED + +  T D   L   YYYF +   F+   G TEL G
Sbjct: 160 YSSQEDGVKFRFTRDCNALTDAYYYFSNGTHFYAVDGRTELLG 202


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,138,904
Number of Sequences: 27780
Number of extensions: 317846
Number of successful extensions: 815
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)