Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_L23
(898 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 127 1e-29
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 122 3e-28
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 122 4e-28
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 118 4e-27
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 115 4e-26
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 102 4e-22
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 101 6e-22
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 98 6e-21
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 97 1e-20
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 96 3e-20
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 95 4e-20
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 95 7e-20
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 90 2e-18
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 90 2e-18
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 90 2e-18
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 77 1e-14
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 73 2e-13
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 71 8e-13
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 59 5e-09
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 56 4e-08
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 52 5e-07
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 32 0.45
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 32 0.45
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 32 0.45
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 28 9.7
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 127 bits (306), Expect = 1e-29
Identities = 69/142 (48%), Positives = 76/142 (53%)
Frame = +3
Query: 309 KVTXKVXFDXXXGXXXXGTXVXGLFGKXVPKTTEXFFQLAXKPEGXGYXGXXFHRVIKNF 488
KVT KV FD G G V GLFG+ VPKT E F L + GY G FHR+IK+F
Sbjct: 92 KVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDF 151
Query: 489 MIQXXXXXXXXXXXXXXXXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXFFITTVXXP 668
MIQ +FED NF LKH G G LSMANAG TNGS FFI TV
Sbjct: 152 MIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTS 211
Query: 669 WLDGXXVVFGKVXKXWXLYXXL 734
WLD VVFG+V + L L
Sbjct: 212 WLDNKHVVFGQVIEGMKLVRTL 233
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 122 bits (294), Expect = 3e-28
Identities = 75/159 (47%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Frame = +3
Query: 252 LGXL-LFXASAXSDXXPKGPKVTXKVXFDXXXGXXXXGTXVXGLFGKXVPKTTEXFFQLA 428
LG L LF A A +VT KV FD G V GLFGK VPKT E F L
Sbjct: 9 LGTLFLFGAIASIQAKEDLKEVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALC 68
Query: 429 XKPEGXG-------YXGXXFHRVIKNFMIQXXXXXXXXXXXXXXXXXXRFEDXNFKLKHY 587
+G G Y G FHR+I +FMIQ +F D NFKLKH
Sbjct: 69 TGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHT 128
Query: 588 GAGWLSMANAGXXTNGSXFFITTVXXPWLDGXXVVFGKV 704
G G LSMAN+G TNGS FFITTV WLDG VVFGKV
Sbjct: 129 GPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKV 167
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 122 bits (293), Expect = 4e-28
Identities = 67/139 (48%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
Frame = +3
Query: 309 KVTXKVXFDXXXGXXXXGTXVXGLFGKXVPKTTEXFFQLAXKPEGXG-------YXGXXF 467
++T KV FD G V GLFGK VPKT E F L +G G Y G F
Sbjct: 32 EITHKVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSF 91
Query: 468 HRVIKNFMIQXXXXXXXXXXXXXXXXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXFF 647
HR+I +FM+Q +F D NFKLKH G G+LSMANAG TNGS FF
Sbjct: 92 HRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFF 151
Query: 648 ITTVXXPWLDGXXVVFGKV 704
ITTV WLDG VVFGKV
Sbjct: 152 ITTVTTSWLDGRHVVFGKV 170
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 118 bits (285), Expect = 4e-27
Identities = 64/135 (47%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Frame = +3
Query: 309 KVTXKVXFDXXXGXXXX---GTXVXGLFGKXVPKTTEXFFQLAXKPEGXGYXGXXFHRVI 479
K+T KV FD G G V GL+G VP+T E F L +G GY G FHRVI
Sbjct: 87 KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 146
Query: 480 KNFMIQXXXXXXXXXXXXXXXXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXFFITTV 659
++FMIQ F+D NFKL H G G LSMANAG TNGS FFI T+
Sbjct: 147 RDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTI 206
Query: 660 XXPWLDGXXVVFGKV 704
WLDG VVFG+V
Sbjct: 207 KTSWLDGRHVVFGQV 221
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 115 bits (277), Expect = 4e-26
Identities = 64/138 (46%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Frame = +3
Query: 312 VTXKVXFDXXXGXXXXGTXVXGLFGKXVPKTTEXFFQLAXKPEGXG-------YXGXXFH 470
VT KV FD G + GLFG VPKT E F L +G G + G FH
Sbjct: 57 VTHKVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFH 116
Query: 471 RVIKNFMIQXXXXXXXXXXXXXXXXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXFFI 650
R+I FMIQ +F D NFKLKH G G+LSMAN+G +NGS FFI
Sbjct: 117 RIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFI 176
Query: 651 TTVXXPWLDGXXVVFGKV 704
TTV WLDG VVFGKV
Sbjct: 177 TTVTTSWLDGHHVVFGKV 194
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 102 bits (244), Expect = 4e-22
Identities = 60/135 (44%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Frame = +3
Query: 321 KVXFDXXXGXXXXGTXVXGLFGKXVPKTTEXFFQLAXKPEGXG-------YXGXXFHRVI 479
KV FD G G V L+ PKT E F L +G G + G FHRVI
Sbjct: 6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVI 65
Query: 480 KNFMIQXXXXXXXXXXXXXXXXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXFFITTV 659
NFM Q +FED NF+ KH G G LSMANAG TNGS FFI TV
Sbjct: 66 PNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTV 125
Query: 660 XXPWLDGXXVVFGKV 704
WLDG VVFG+V
Sbjct: 126 KTDWLDGKHVVFGQV 140
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 101 bits (242), Expect = 6e-22
Identities = 59/135 (43%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Frame = +3
Query: 321 KVXFDXXXGXXXXGTXVXGLFGKXVPKTTEXFFQLAXKPEGXG-------YXGXXFHRVI 479
KV FD G G V LF P+T F L G G Y G FHR+I
Sbjct: 5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRII 64
Query: 480 KNFMIQXXXXXXXXXXXXXXXXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXFFITTV 659
FM Q +FED NFKLKH G G LSMAN+G TNGS FFI T
Sbjct: 65 PGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTE 124
Query: 660 XXPWLDGXXVVFGKV 704
WLDG VVFGKV
Sbjct: 125 KTSWLDGKHVVFGKV 139
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 98.3 bits (234), Expect = 6e-21
Identities = 58/135 (42%), Positives = 65/135 (48%), Gaps = 7/135 (5%)
Frame = +3
Query: 321 KVXFDXXXGXXXXGTXVXGLFGKXVPKTTEXFFQLAXKPEGXG-------YXGXXFHRVI 479
KV FD G V L+ P+T E F L +G G + G FHRVI
Sbjct: 5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVI 64
Query: 480 KNFMIQXXXXXXXXXXXXXXXXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXFFITTV 659
NFM Q +FED NF+ KH G G LSMANAG TNGS FFI TV
Sbjct: 65 PNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTV 124
Query: 660 XXPWLDGXXVVFGKV 704
WLDG VVFG+V
Sbjct: 125 KTDWLDGKHVVFGQV 139
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 97.5 bits (232), Expect = 1e-20
Identities = 59/138 (42%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Frame = +3
Query: 321 KVXFDXXXGXXXXGTXVXGLFGKXVPKTTEXFFQLAXKPEGXG--------YXGXXFHRV 476
K D G G V L+ VPKT E F L +G G Y G FHRV
Sbjct: 5 KCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRV 64
Query: 477 IKNFMIQXXXXXXXXXXXXXXXXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXFFITT 656
IK FMIQ +F+D NF+LKH G LSMAN+G TNGS FFITT
Sbjct: 65 IKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITT 124
Query: 657 VXXPWLDGXXVVFGKVXK 710
LDG VVFG+V K
Sbjct: 125 TRTSHLDGKHVVFGRVTK 142
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 95.9 bits (228), Expect = 3e-20
Identities = 60/169 (35%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
Frame = +3
Query: 222 VLIXGXLTMALGXLLFXASAXSDXXP-KGPKVTXKVXFDXXXGXXXXGTXVXGLFGKXVP 398
+L+ LT+ L LF + + ++T +V D G V GL+G VP
Sbjct: 14 LLLLVALTIFLVFALFNTGKDEEKQVIEDHEITNRVFLDVDIDGQRLGRIVIGLYGTVVP 73
Query: 399 KTTEXFFQLAXKPEGXG-------YXGXXFHRVIKNFMIQXXXXXXXXXXXXXXXXXXRF 557
KT E F L +G Y G FHR+I F+IQ F
Sbjct: 74 KTVENFRALCTGEKGKTSSGKPLHYKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYGGTF 133
Query: 558 EDXNFKLKHYGAGWLSMANAGXXTNGSXFFITTVXXPWLDGXXVVFGKV 704
D NFK++H AG ++MAN G +NGS FFITTV WL+G VV GKV
Sbjct: 134 PDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLGKV 182
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 95.5 bits (227), Expect = 4e-20
Identities = 60/143 (41%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Frame = +3
Query: 297 PKGPKVTXKVXFDXXXGXXXXGTXVXGLFGKXVPKTTEXFFQL-------AXKPEGXGYX 455
P PK V FD G G LF PKT E F Q A KP GY
Sbjct: 26 PPNPK-NPVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKP--LGYK 82
Query: 456 GXXFHRVIKNFMIQXXXXXXXXXXXXXXXXXXRFEDXNFKLKHYGAGWLSMANAGXXTNG 635
FHRVIK+FM+Q +FED NF KH G G LSMAN+G TNG
Sbjct: 83 ECQFHRVIKDFMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNG 142
Query: 636 SXFFITTVXXPWLDGXXVVFGKV 704
FFIT WLD VVFG+V
Sbjct: 143 CQFFITCAKCDWLDNKHVVFGRV 165
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 94.7 bits (225), Expect = 7e-20
Identities = 57/135 (42%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Frame = +3
Query: 321 KVXFDXXXGXXXXGTXVXGLFGKXVPKTTEXFFQLAXKPEGXG-------YXGXXFHRVI 479
KV FD G G V L+ P+T E F L G G Y G FHRVI
Sbjct: 6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVI 65
Query: 480 KNFMIQXXXXXXXXXXXXXXXXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXFFITTV 659
FM Q +F+D NF KH G G LSMANAG TNGS FFI T
Sbjct: 66 PKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTE 125
Query: 660 XXPWLDGXXVVFGKV 704
WLDG VVFG+V
Sbjct: 126 KTSWLDGKHVVFGQV 140
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 90.2 bits (214), Expect = 2e-18
Identities = 55/137 (40%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Frame = +3
Query: 321 KVXFDXXXGXXXXGTXVXGLFGKXVPKTTEXFFQLAXKPEGXG-------YXGXXFHRVI 479
+V FD G LF P T E F L +G G + G FHRVI
Sbjct: 5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVI 64
Query: 480 KNFMIQXXXXXXXXXXXXXXXXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXFFITTV 659
FM Q +F+D NF KH GAG LSMAN+G TNGS FFI T
Sbjct: 65 PGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTD 124
Query: 660 XXPWLDGXXVVFGKVXK 710
WLDG VVFG+V K
Sbjct: 125 KTSWLDGKHVVFGQVVK 141
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 90.2 bits (214), Expect = 2e-18
Identities = 58/140 (41%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Frame = +3
Query: 309 KVTXKVXFDXXXGXXXXGTXVXGLFGKXVPKTTEXFFQLAXKPEGXG--------YXGXX 464
K V D G V LF VPKT E F L G G + G
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 465 FHRVIKNFMIQXXXXXXXXXXXXXXXXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXF 644
FHRVIK FM Q +F D NF+L H GAG LSMAN G TNGS F
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQF 123
Query: 645 FITTVXXPWLDGXXVVFGKV 704
FI P LDG VVFGKV
Sbjct: 124 FILFKRQPHLDGKHVVFGKV 143
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 90.2 bits (214), Expect = 2e-18
Identities = 58/140 (41%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Frame = +3
Query: 309 KVTXKVXFDXXXGXXXXGTXVXGLFGKXVPKTTEXFFQLAXKPEGXG--------YXGXX 464
K V D G V LF VPKT E F L G G + G
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 465 FHRVIKNFMIQXXXXXXXXXXXXXXXXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXF 644
FHRVIK FM Q +F D NF+L H GAG LSMAN G TNGS F
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQF 123
Query: 645 FITTVXXPWLDGXXVVFGKV 704
FI P LDG VVFGKV
Sbjct: 124 FILFKRQPHLDGKHVVFGKV 143
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 77.4 bits (182), Expect = 1e-14
Identities = 42/117 (35%), Positives = 59/117 (50%)
Frame = +3
Query: 360 GTXVXGLFGKXVPKTTEXFFQLAXKPEGXGYXGXXFHRVIKNFMIQXXXXXXXXXXXXXX 539
G ++ K P+T F +L+ + Y FHR++K+F++Q
Sbjct: 19 GPFTVEMYYKHSPRTCRNFLELSRRGY---YDNVLFHRIVKDFIVQGGDPTGTGRGGESI 75
Query: 540 XXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXFFITTVXXPWLDGXXVVFGKVXK 710
++ N +LKH GAG LSMANAG TNGS FFIT P LDG +FG+V +
Sbjct: 76 YGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRVCR 132
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 73.3 bits (172), Expect = 2e-13
Identities = 48/112 (42%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +3
Query: 378 LFGKXVPKTTEXFFQLAXKPEGXGYXGXXFHRVIKNFMIQXXXXXXXXXXXXXXXXXXRF 557
L+ + PKT E F Y FHRVI+ FMIQ F
Sbjct: 491 LYPEECPKTVENF---TTHCRNGYYDNHLFHRVIRGFMIQTGDPLGDGTGGQSIWGR-EF 546
Query: 558 EDXNFK-LKHYGAGWLSMANAGXXTNGSXFFITTVXXPWLDGXXVVFGKVXK 710
ED K L+H LSMANAG TNGS FFITTV PWLD VFG+V K
Sbjct: 547 EDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVK 598
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 71.3 bits (167), Expect = 8e-13
Identities = 45/109 (41%), Positives = 52/109 (47%)
Frame = +3
Query: 378 LFGKXVPKTTEXFFQLAXKPEGXGYXGXXFHRVIKNFMIQXXXXXXXXXXXXXXXXXXRF 557
+F VPK+ E F LA G Y G FHR IK FMIQ
Sbjct: 16 IFCDEVPKSAENF--LALCASGY-YDGTIFHRNIKGFMIQGGDPKGTGKGGTSIWGKKFN 72
Query: 558 EDXNFKLKHYGAGWLSMANAGXXTNGSXFFITTVXXPWLDGXXVVFGKV 704
++ LKH G LSMAN+G TNGS FFIT P L+G +FGKV
Sbjct: 73 DEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKV 121
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 58.8 bits (136), Expect = 5e-09
Identities = 38/103 (36%), Positives = 46/103 (44%)
Frame = +3
Query: 396 PKTTEXFFQLAXKPEGXGYXGXXFHRVIKNFMIQXXXXXXXXXXXXXXXXXXRFEDXNFK 575
P+ E F L E Y G FHR I+NFMIQ ++ N K
Sbjct: 365 PRACENFITLC---ERGYYNGVAFHRSIRNFMIQGGDPTGTGKGGESIWGKPFKDEPNSK 421
Query: 576 LKHYGAGWLSMANAGXXTNGSXFFITTVXXPWLDGXXVVFGKV 704
L H G G +SMAN+G TNGS FF+ L+ VFG V
Sbjct: 422 LLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGV 464
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 55.6 bits (128), Expect = 4e-08
Identities = 44/140 (31%), Positives = 55/140 (39%), Gaps = 8/140 (5%)
Frame = +3
Query: 309 KVTXKVXFDXXXGXXXXGTXVXGLFGKXVPKTTEXFFQLAXKPEGXG--------YXGXX 464
K +V D T V LF + PKT+E F L +G G Y G
Sbjct: 4 KKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSF 63
Query: 465 FHRVIKNFMIQXXXXXXXXXXXXXXXXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXF 644
FHR++K Q +F D + KL+H G LSM+ A GS F
Sbjct: 64 FHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHF 123
Query: 645 FITTVXXPWLDGXXVVFGKV 704
IT LD VVFGK+
Sbjct: 124 HITFRPNQQLDRNNVVFGKL 143
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 52.0 bits (119), Expect = 5e-07
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Frame = +3
Query: 378 LFGKXVPKTTEXFFQLAXKPEGXGYXGXXFHRVIKNFMIQXXXXXXXXXXXXXXXXXXRF 557
L+ K PK+ F QL EG + FHRVI F++Q
Sbjct: 28 LWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIPGFLVQGGDPTGSGTGGDSIYGGVFA 84
Query: 558 EDXNFKLKHYGAGWLSMANAGXX-TNGSXFFITTVXXPWLDGXXVVFGKV 704
++ + +L+ G ++MANA +NGS FF T WLD +FGKV
Sbjct: 85 DEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKV 134
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 32.3 bits (70), Expect = 0.45
Identities = 29/117 (24%), Positives = 41/117 (35%)
Frame = +3
Query: 360 GTXVXGLFGKXVPKTTEXFFQLAXKPEGXGYXGXXFHRVIKNFMIQXXXXXXXXXXXXXX 539
G LF + P+ + F L K + G F RVIKN+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146
Query: 540 XXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXFFITTVXXPWLDGXXVVFGKVXK 710
+ KH + N G ITT P L+ +VFG+V K
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQLIVFGRVLK 202
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 32.3 bits (70), Expect = 0.45
Identities = 29/117 (24%), Positives = 41/117 (35%)
Frame = +3
Query: 360 GTXVXGLFGKXVPKTTEXFFQLAXKPEGXGYXGXXFHRVIKNFMIQXXXXXXXXXXXXXX 539
G LF + P+ + F L K + G F RVIKN+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146
Query: 540 XXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXFFITTVXXPWLDGXXVVFGKVXK 710
+ KH + N G ITT P L+ +VFG+V K
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQLIVFGRVLK 202
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 32.3 bits (70), Expect = 0.45
Identities = 29/117 (24%), Positives = 41/117 (35%)
Frame = +3
Query: 360 GTXVXGLFGKXVPKTTEXFFQLAXKPEGXGYXGXXFHRVIKNFMIQXXXXXXXXXXXXXX 539
G LF + P+ + F L K + G F RVIKN+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146
Query: 540 XXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXFFITTVXXPWLDGXXVVFGKVXK 710
+ KH + N G ITT P L+ +VFG+V K
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQLIVFGRVLK 202
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 27.9 bits (59), Expect = 9.7
Identities = 28/117 (23%), Positives = 42/117 (35%)
Frame = +3
Query: 360 GTXVXGLFGKXVPKTTEXFFQLAXKPEGXGYXGXXFHRVIKNFMIQXXXXXXXXXXXXXX 539
G+ LF P + F + +G + G F RV+K+F+IQ
Sbjct: 87 GSVTIELFKDTAPNVVDQFMKFCQ--DGY-FKGFLFSRVVKHFVIQAGDSAEFDAVKDWA 143
Query: 540 XXXXRFEDXNFKLKHYGAGWLSMANAGXXTNGSXFFITTVXXPWLDGXXVVFGKVXK 710
D + K + + G A G FFI + L+ VFG+V K
Sbjct: 144 LDRKNI-DTSLKHEEFMVG---TPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSK 196
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,925,600
Number of Sequences: 28952
Number of extensions: 91060
Number of successful extensions: 133
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2110422216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -