Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_L22
         (888 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   4.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   4.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   7.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -3

Query: 511 ILPLFY*LLKIFMFICLRYYCRYF 440
           +L ++Y    + + +C+ Y+CR F
Sbjct: 282 LLCIYYFYCALIILLCIYYFCRAF 305



 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 610 LHLLPCWRCLIISRLXTYSAQKSFLLLSFRLFNVVLLHY 726
           +HLL  + C++I  L  Y    +F+L +  L  +V ++Y
Sbjct: 224 IHLL--FYCVLIILLCIYYFYYAFILFTVHLLLLVCIYY 260



 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/24 (29%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -3

Query: 511 ILPLFY*LLKIFMFICLRY-YCRY 443
           +L ++Y ++ +F  +C+ Y YC +
Sbjct: 130 LLCIYYFVVPLFFLLCIYYFYCAF 153


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 306 TLYLILFVFL*FRTVD*SFSLLEYVD 229
           TL + LF FL   T+  SF +L +VD
Sbjct: 102 TLIVTLFTFLARGTLIKSFDMLSHVD 127


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 306 TLYLILFVFL*FRTVD*SFSLLEYVD 229
           TL + LF FL   T+  SF +L +VD
Sbjct: 102 TLIVTLFTFLARGTLIKSFDMLSHVD 127


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 562 LVSSVSKVLRQRTKDXLHLLPCW 630
           L S + KVL ++ K    L  CW
Sbjct: 212 LTSKIYKVLEEKYKTSGSLYTCW 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,317
Number of Sequences: 336
Number of extensions: 3099
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)