Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_L20
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    24   1.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   7.1  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   7.1  

>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +1

Query: 250 EMQHLDXMMKELSLKFPSI-INEGRVEGD 333
           EM++L+ ++KE    +PS+ + E R+E D
Sbjct: 43  EMKYLEMVLKEAQRLYPSVPVIERRLEVD 71


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 454 NLPWDVNSEGSWV 492
           N  WDV+S GSW+
Sbjct: 187 NAWWDVHSTGSWL 199


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -3

Query: 712 RTXSLXQLSRSHWSSGLSPSRRQRPA 635
           R  S   L  S+W   LSP  RQ  A
Sbjct: 389 RYMSTIDLRSSYWQIPLSPESRQYTA 414


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 129 PRPPPAGRTNTKASXRVERANN 64
           P+P    R N +   RV++ NN
Sbjct: 49  PQPVAVARRNARERNRVKQVNN 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,447
Number of Sequences: 336
Number of extensions: 3483
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)