Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_L19
(904 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48657| Best HMM Match : GST_C (HMM E-Value=5.8e-07) 74 2e-13
SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_13078| Best HMM Match : RVP (HMM E-Value=0.039) 29 5.1
SB_51018| Best HMM Match : RVT_1 (HMM E-Value=5.8e-17) 28 9.0
SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_28788| Best HMM Match : RVP (HMM E-Value=0.028) 28 9.0
SB_23218| Best HMM Match : zf-CCHC (HMM E-Value=0.00066) 28 9.0
SB_12598| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_8572| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17) 28 9.0
SB_3903| Best HMM Match : RVT_1 (HMM E-Value=4.5e-17) 28 9.0
SB_860| Best HMM Match : RVP (HMM E-Value=0.018) 28 9.0
SB_50204| Best HMM Match : rve (HMM E-Value=6.6e-22) 28 9.0
SB_46473| Best HMM Match : RVP (HMM E-Value=0.029) 28 9.0
SB_29974| Best HMM Match : RVT_1 (HMM E-Value=3e-17) 28 9.0
SB_27267| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17) 28 9.0
SB_8937| Best HMM Match : RVP (HMM E-Value=0.029) 28 9.0
SB_4291| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_48657| Best HMM Match : GST_C (HMM E-Value=5.8e-07)
Length = 203
Score = 73.7 bits (173), Expect = 2e-13
Identities = 45/117 (38%), Positives = 65/117 (55%)
Frame = +1
Query: 187 NKSEAFLXQFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGXLATQARVWQWASWS 366
N + FL +FP GKVPAFE+ AN R L T + +++
Sbjct: 40 NHTAEFLKKFPLGKVPAFETK---------------TANACTRAMPLLTT-----YVNFA 79
Query: 367 DSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITL 537
D ELLPA+ WVFP G+MQ++KQ+ ++A D+ + +L+ LL +TFLV ER+TL
Sbjct: 80 DQELLPAAATWVFPTYGMMQYHKQSTDKAMEDVKKYMTMLNDVLLMKTFLVGERVTL 136
>SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 285 RLLRCQ*KSPRRXSGYPSPCLAVGIMV*Q*TTACFLCLGLPLPWYHAIQQ 434
R++R Q P PSPC A+ + +T +C LP PWY AI Q
Sbjct: 1039 RVMR-QYTKPVLCGNQPSPCYAM-----RQSTKPVVCGNLPSPWYAAIYQ 1082
>SB_13078| Best HMM Match : RVP (HMM E-Value=0.039)
Length = 251
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 428 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLADVIVFSTLLHA 574
S ++ + +LT P K + D FS+ P +LP + HL + ++HA
Sbjct: 165 SREQIKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_51018| Best HMM Match : RVT_1 (HMM E-Value=5.8e-17)
Length = 635
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 428 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLADVIVFSTLLHA 574
S + + +LT P K + D FS+ P +LP + HL + ++HA
Sbjct: 113 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 161
>SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 591 SSTCWKACSSVLKTMTSAKCDSLGNKEGAC 502
SS CWK+CS +C L KEG C
Sbjct: 463 SSQCWKSCSGCCVDKKPVQC-PLWAKEGEC 491
>SB_28788| Best HMM Match : RVP (HMM E-Value=0.028)
Length = 278
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 428 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLADVIVFSTLLHA 574
S + + +LT P K + D FS+ P +LP + HL + ++HA
Sbjct: 165 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_23218| Best HMM Match : zf-CCHC (HMM E-Value=0.00066)
Length = 557
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 428 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLADVIVFSTLLHA 574
S + + +LT P K + D FS+ P +LP + HL + ++HA
Sbjct: 386 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 434
>SB_12598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 428 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLADVIVFSTLLHA 574
S + + +LT P K + D FS+ P +LP + HL + ++HA
Sbjct: 165 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_8572| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17)
Length = 1432
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 428 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLADVIVFSTLLHA 574
S + + +LT P K + D FS+ P +LP + HL + ++HA
Sbjct: 281 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 329
>SB_3903| Best HMM Match : RVT_1 (HMM E-Value=4.5e-17)
Length = 609
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 428 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLADVIVFSTLLHA 574
S + + +LT P K + D FS+ P +LP + HL + ++HA
Sbjct: 303 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 351
>SB_860| Best HMM Match : RVP (HMM E-Value=0.018)
Length = 260
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 428 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLADVIVFSTLLHA 574
S + + +LT P K + D FS+ P +LP + HL + ++HA
Sbjct: 147 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 195
>SB_50204| Best HMM Match : rve (HMM E-Value=6.6e-22)
Length = 800
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 428 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLADVIVFSTLLHA 574
S + + +LT P K + D FS+ P +LP + HL + ++HA
Sbjct: 113 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 161
>SB_46473| Best HMM Match : RVP (HMM E-Value=0.029)
Length = 304
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 428 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLADVIVFSTLLHA 574
S + + +LT P K + D FS+ P +LP + HL + ++HA
Sbjct: 165 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_29974| Best HMM Match : RVT_1 (HMM E-Value=3e-17)
Length = 890
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 428 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLADVIVFSTLLHA 574
S + + +LT P K + D FS+ P +LP + HL + ++HA
Sbjct: 113 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 161
>SB_27267| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17)
Length = 649
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 428 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLADVIVFSTLLHA 574
S + + +LT P K + D FS+ P +LP + HL + ++HA
Sbjct: 337 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 385
>SB_8937| Best HMM Match : RVP (HMM E-Value=0.029)
Length = 303
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 428 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLADVIVFSTLLHA 574
S + + +LT P K + D FS+ P +LP + HL + ++HA
Sbjct: 165 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_4291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 428 STNRMLNVQSLTYWPP*KYWTDIFSHAPSLLPRESHLADVIVFSTLLHA 574
S + + +LT P K + D FS+ P +LP + HL + ++HA
Sbjct: 61 SREQSKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 109
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,533,895
Number of Sequences: 59808
Number of extensions: 481226
Number of successful extensions: 1176
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2597949818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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