Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_L19
         (904 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           23   3.8  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    22   6.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.7  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   8.8  

>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 543 SAKCDSLGNKEGACEK 496
           +A C SLG   G CEK
Sbjct: 36  AANCHSLGKAGGHCEK 51


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 543 SAKCDSLGNKEGACEKM 493
           +A C SLG   G CEK+
Sbjct: 61  AANCLSLGKAGGHCEKV 77


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 543 SAKCDSLGNKEGACEKMSVQYF*GGQ*VRLC 451
           + KC++L      C + SV Y  G    +LC
Sbjct: 352 NTKCNTLERTPSKCSQTSVHYSNGQTHSQLC 382


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 543 SAKCDSLGNKEGACEK 496
           +A C SLG   G CEK
Sbjct: 61  AANCLSLGKAGGHCEK 76


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,743
Number of Sequences: 438
Number of extensions: 3819
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)