Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_L17
         (903 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q73LP8 Cluster: Putative uncharacterized protein; n=1; ...    42   0.016
UniRef50_A2DW30 Cluster: Putative uncharacterized protein; n=1; ...    38   0.46 
UniRef50_Q54JG6 Cluster: Putative uncharacterized protein; n=1; ...    35   3.3  
UniRef50_Q8XMF2 Cluster: Probable fibronectin-binding protein; n...    33   10.0 

>UniRef50_Q73LP8 Cluster: Putative uncharacterized protein; n=1;
           Treponema denticola|Rep: Putative uncharacterized
           protein - Treponema denticola
          Length = 294

 Score = 42.3 bits (95), Expect = 0.016
 Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
 Frame = +1

Query: 364 YQSITRETRT-YVLKKMPCTYKRKTELKYSLEDLKKAIDDVKTKKLSLRKHITFQKPQIL 540
           +QS + E    Y+++ +P  Y  K  L Y LE++KK  DD++T+K+ +  +    +P+IL
Sbjct: 85  FQSFSNEEIVNYIIENVPRVYYPKNCLSYILEEIKKYNDDLETRKIPISPNAFIIQPEIL 144

Query: 541 TI 546
           ++
Sbjct: 145 SL 146


>UniRef50_A2DW30 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 388

 Score = 37.5 bits (83), Expect = 0.46
 Identities = 20/70 (28%), Positives = 39/70 (55%)
 Frame = +3

Query: 45  LSYIYNGFQNCLPNIGSSHSSTRLV*FLLYMVLKFYLLTIAYYLCLPHMTNVGSPDLLKT 224
           +S+ YNG QN L  +  +     L+ F ++ VLK+Y     Y+  L + T+ G+ D+++ 
Sbjct: 134 ISFGYNGCQNILTEVERNEEIFDLLAFTVFSVLKYYENLTVYHSLLVYCTSRGT-DVIEP 192

Query: 225 YYPYLYN*GK 254
              Y+++ G+
Sbjct: 193 LLNYIHSGGR 202


>UniRef50_Q54JG6 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 2037

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 364  YQSITRETRTYVLKKMPCTYKRKTELKYSLEDLKKAIDDVK 486
            YQSI  E    +L+    T +   EL   LEDLKK ++D+K
Sbjct: 1433 YQSIDPEVHQKLLETNETTIRENQELTQQLEDLKKQLEDLK 1473


>UniRef50_Q8XMF2 Cluster: Probable fibronectin-binding protein; n=4;
           Clostridium|Rep: Probable fibronectin-binding protein -
           Clostridium perfringens
          Length = 220

 Score = 33.1 bits (72), Expect = 10.0
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +1

Query: 673 KCNERTPSSKKYERLLKNLNXIK 741
           KCNER  S+ K E+LLK++N IK
Sbjct: 197 KCNERITSTDKLEKLLKDVNNIK 219


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,771,859
Number of Sequences: 1657284
Number of extensions: 13316319
Number of successful extensions: 31991
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31977
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)