Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_L17
         (903 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1462 - 33769122-33769151,33769385-33769426,33769571-337701...    30   2.9  
02_04_0013 - 18910009-18910056,18910154-18910282,18910373-189104...    29   3.8  
12_02_0588 - 20842209-20842337,20842464-20842560,20842620-208427...    29   6.7  
01_06_0348 + 28598822-28599055,28599146-28599233,28599322-285993...    28   8.8  

>04_04_1462 -
           33769122-33769151,33769385-33769426,33769571-33770158,
           33770398-33770508,33770585-33770625,33771238-33771382,
           33771578-33771781,33772626-33772769,33772991-33773183,
           33774559-33774602,33774694-33774822,33774907-33774954,
           33775058-33775120,33775198-33775236,33776694-33776767,
           33777460-33777518,33777709-33777768,33777920-33778044,
           33778693-33778751,33779418-33779511,33779572-33779625,
           33779775-33779813,33780423-33780602
          Length = 854

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +1

Query: 424 KRKTELKYSLEDLKKAIDDVKTKKLSLRKHITFQK 528
           +RK ELK + E  KKAIDD+  K     ++I F K
Sbjct: 291 ERKRELKQAKEARKKAIDDMDPKVKEAFENIKFYK 325


>02_04_0013 -
           18910009-18910056,18910154-18910282,18910373-18910420,
           18910532-18910594,18910675-18910713,18912107-18912180,
           18913014-18913072,18913265-18913324,18913466-18913590,
           18914054-18914112,18914356-18914419,18914516-18914569,
           18914727-18914765,18916135-18916275
          Length = 333

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +1

Query: 424 KRKTELKYSLEDLKKAIDDVKTKKLSLRKHITFQK 528
           +RK ELK + E  KKAIDD+  K     ++I F K
Sbjct: 268 ERKRELKQAKEARKKAIDDMDPKIKEAFENIQFYK 302


>12_02_0588 -
           20842209-20842337,20842464-20842560,20842620-20842733,
           20843140-20843749,20844739-20845462,20845542-20845620,
           20845783-20845865,20846148-20846226,20846332-20846420,
           20846499-20846591,20847288-20847337,20847417-20847600,
           20849227-20849542,20849626-20849657
          Length = 892

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 813 FCIFCXDKYIDPPVEXXIXCYVCXRWAH 896
           +C  C   Y D  V   + C VC +W H
Sbjct: 275 YCPVCLKVYRDSEVIPMVCCDVCEKWVH 302


>01_06_0348 +
           28598822-28599055,28599146-28599233,28599322-28599377,
           28599538-28599631,28599824-28599865,28599941-28600012,
           28600134-28600193,28600490-28600683
          Length = 279

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 407 FLSTYVRVSRVIDWYQWWRDLRNGG 333
           +L+  V VSRV D++  W+D+  GG
Sbjct: 169 YLAALVAVSRVDDYWHHWQDVFTGG 193


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,896,472
Number of Sequences: 37544
Number of extensions: 338608
Number of successful extensions: 742
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)