Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_L17
         (903 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00036-15|AAK29857.1|  731|Caenorhabditis elegans Hypothetical p...    30   2.6  
AF143148-1|AAD37914.1|  315|Caenorhabditis elegans R151.8B prote...    30   2.6  

>U00036-15|AAK29857.1|  731|Caenorhabditis elegans Hypothetical
           protein R151.8 protein.
          Length = 731

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 364 YQSITRETRTYVLKKMPCTYKRKT-ELKYSLEDLKKAIDDVKTKKLSLRKHITFQKP 531
           + +I R+ R   L    C YKRKT  +K  +E LK+ + +      + RK +T + P
Sbjct: 151 FANIPRDARELFLLINACEYKRKTVNMKVIVEKLKELVFEGTVVVRAGRKLVTIKTP 207


>AF143148-1|AAD37914.1|  315|Caenorhabditis elegans R151.8B protein
           protein.
          Length = 315

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 364 YQSITRETRTYVLKKMPCTYKRKT-ELKYSLEDLKKAIDDVKTKKLSLRKHITFQKP 531
           + +I R+ R   L    C YKRKT  +K  +E LK+ + +      + RK +T + P
Sbjct: 151 FANIPRDARELFLLINACEYKRKTVNMKVIVEKLKELVFEGTVVVRAGRKLVTIKTP 207


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,088,790
Number of Sequences: 27780
Number of extensions: 332439
Number of successful extensions: 853
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)