Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_L16
         (903 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0218 + 18219956-18220555                                         33   0.31 
08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     30   2.9  
08_01_0156 - 1233431-1233925                                           29   6.7  
03_06_0711 - 35682293-35682952                                         29   6.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.8  
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756...    28   8.8  
03_06_0149 - 31987183-31987630,31987813-31987874                       28   8.8  
03_04_0061 - 16949038-16950006                                         28   8.8  

>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 22/63 (34%), Positives = 27/63 (42%)
 Frame = -1

Query: 810 NGGFVHTAQLGANDLHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 631
           NGG     ++ A    +T  P     R R   R E  G  + KR+GR R    G  RGKR
Sbjct: 81  NGGLTEGEEVAARPREKTARPDG--ARARRERRLEAAG--AEKREGRRRGGSSGGLRGKR 136

Query: 630 LVS 622
             S
Sbjct: 137 RAS 139


>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 645 SRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 526
           SRGK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 25  SRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>08_01_0156 - 1233431-1233925
          Length = 164

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = -1

Query: 783 LGANDLHRTEIPTA*AMRKRHASRREK--GGQVSGKRQGRNRRAHEGASRGKRLVSL*SC 610
           LG  D   TE+  A A     A+R E+  GG   G R G   RA +   +G     +   
Sbjct: 89  LGDADATATEVDAAAAAEAEAAARGERGDGGGDGGGRAGGRGRARDEREKGAAADRVLGV 148

Query: 609 RVSPPLT 589
           R SP ++
Sbjct: 149 RASPTVS 155


>03_06_0711 - 35682293-35682952
          Length = 219

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 805 PVQPXRXALSGXIVLSPPGRPDLSPL 882
           P QP   A S    LSPP  P+ SPL
Sbjct: 57  PSQPPSEASSSAAALSPPAPPETSPL 82


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 309 NESAN---ARGEAVCVLGALPLPRSLTRCAR 392
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_1344 -
           29472139-29473292,29474478-29475386,29475504-29475618,
           29476017-29476218,29477177-29477296,29477431-29477582,
           29478177-29478461
          Length = 978

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 22/80 (27%), Positives = 30/80 (37%)
 Frame = +1

Query: 664 PVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV*VVRSKLGCVHEPPVQPXRXALSGXI 843
           P PT P  G   +  PS +   S++     LSS     +   C+H+PP  P         
Sbjct: 598 PKPTTPEQGRQQSE-PSPTPEASNARGGEMLSS----STSTHCLHQPPPPPASHQFRSAA 652

Query: 844 VLSPPGRPDLSPLAXAPGTG 903
               P  P  +PL   P  G
Sbjct: 653 AFRRPPSPAAAPLRARPQRG 672


>03_06_0149 - 31987183-31987630,31987813-31987874
          Length = 169

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 738 AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRG 637
           A+ + H   R +   +  +R+GR R AHEG   G
Sbjct: 76  AVARGHGLERLQEAGIEAERRGRRRNAHEGIKIG 109


>03_04_0061 - 16949038-16950006
          Length = 322

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 612 RTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGA 728
           RT+K PG+   ++PRA+  + P  Y   VR +   +R A
Sbjct: 255 RTMKGPGLGGARVPRAVFRASPRRYYAAVRTARKARRSA 293


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,312,707
Number of Sequences: 37544
Number of extensions: 536338
Number of successful extensions: 1667
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1667
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)