Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_L15
(909 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 36 0.006
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 35 0.018
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 33 0.056
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 33 0.056
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 31 0.23
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.23
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 31 0.30
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.39
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 30 0.39
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 0.52
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 29 0.91
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 29 1.2
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 29 1.2
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 29 1.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.2
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 28 1.6
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 28 1.6
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 3.7
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.7
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 27 3.7
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 26 6.4
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 26 6.4
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 36.3 bits (80), Expect = 0.006
Identities = 26/117 (22%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +1
Query: 190 AMCEQQAXDANLRAEKAEEXARQLQKKIQTIENELDQT----QESLMQVNGKLEEKEKAL 357
A EQQ + E++ Q +++T+ENEL Q QE + Q + +E + +
Sbjct: 415 AELEQQLLATRGQLEQSNVLLNQYDARVRTLENELSQAGVNLQEQIHQNDDLIESLKNQI 474
Query: 358 QNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSL 528
+++ AL + K S A +A D+ E+ + ++N++L
Sbjct: 475 LTWKNKYEALAKLYTQLRQEHLDLLSKYKQIQLKASSAQEAIDKKEKMEREMKNKNL 531
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 34.7 bits (76), Expect = 0.018
Identities = 33/170 (19%), Positives = 65/170 (38%), Gaps = 7/170 (4%)
Frame = +1
Query: 259 LQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXX 438
L+ K + +EN+L+ E L + N E + ++ AE ALN +
Sbjct: 748 LESKNKKLENDLNLLTEKLNKKNADTESFKNTIREAELSKKALNDNLGNKENIISDLKNK 807
Query: 439 XATATAKLSEASQAADESERARKVLENRSLADEERMDALE----NQLKEARFLAEEADKX 606
+ + +L E ++ + + L R A + + ++E NQ E + ++
Sbjct: 808 LSEESTRLQELQSQLNQDKNQIETLNERISAAADELSSMESINKNQANELKLAKQKCSNL 867
Query: 607 YDEV--ARKLAMVEADLXXXXXXXXXXXXKIVE-LEEELRVVGNNLKSLE 747
+++ KLA + K L +EL+ V + SL+
Sbjct: 868 QEKINFGNKLAKEHTEKISSLEKDLEAATKTASTLSKELKTVKSENDSLK 917
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 33.1 bits (72), Expect = 0.056
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Frame = +1
Query: 232 EKAEEXARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXX 411
EKAE A++ ++ +E E + +E+ Q + EEK K E+E A +
Sbjct: 539 EKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAK----REAEEKAKREAEEKAK 594
Query: 412 XXXXXXXXXXATATAKLSEASQAADES-ERARKVLENRSLADEERMDALENQLKEARFLA 588
A AK +A E+ E+A++ E ++ + E E + K R
Sbjct: 595 REAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAE 654
Query: 589 EEADKXYDEVARKLAMVEA 645
E+A + +E A++ A +A
Sbjct: 655 EKAKREAEENAKREAEEKA 673
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 33.1 bits (72), Expect = 0.056
Identities = 31/155 (20%), Positives = 65/155 (41%), Gaps = 7/155 (4%)
Frame = +1
Query: 181 DRAAMCEQQAXDANLRAEKAEEXARQLQKKIQTIENELDQTQESLMQ-------VNGKLE 339
++ ++ + D + + E RQLQ ++ + ELD Q+ L + + ++E
Sbjct: 264 EKDSLSTEMEEDKSNKEVDYEYEIRQLQNRLDELSEELDVAQDLLTEKEDEIATLKRQIE 323
Query: 340 EKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLEN 519
EKE + E+E + +Q A L+ + E++ + +
Sbjct: 324 EKENSSSAFENEENSSYVHLQEDYAILQAKCDEFADRIQVLTADLEKEKENQIMHESEAS 383
Query: 520 RSLADEERMDALENQLKEARFLAEEADKXYDEVAR 624
L D ++ L+ QL +A EE + +D+++R
Sbjct: 384 IGLTDSMQVHTLQEQLHKAN---EEIEFLHDQISR 415
Score = 28.3 bits (60), Expect = 1.6
Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 15/154 (9%)
Frame = +1
Query: 214 DANLRAEKAEEXARQLQKKIQTIENE----------LDQTQESLMQVNGKLEEKEK---- 351
D L+ EE L+ K+QT+E++ L ESL N +++E++
Sbjct: 425 DIMLQFRSLEEERDVLESKLQTLEDDNNSLRLMTSSLGNQIESLRTQNREIDEEKNHLRL 484
Query: 352 -ALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSL 528
A +N++ +A N R+Q + L+E +E+E +++ +
Sbjct: 485 LASKNSDKALAETNIRLQEVTKELETLRMKNSN---DLNEIHDLREENEGLTLKIDSITK 541
Query: 529 ADEERMDALENQLKEARFLAEEADKXYDEVARKL 630
+ ++ LE ++K E + DE KL
Sbjct: 542 EKDRLINELEQRIKSYEVNVSELNGTIDEYRNKL 575
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 31.1 bits (67), Expect = 0.23
Identities = 27/76 (35%), Positives = 33/76 (43%)
Frame = -3
Query: 640 QPWPAYEQPHRXSCRPPQRGTWLPSADSRGRPCAPHPPTTCSRAPYVRARIHRRPGWPRT 461
QP P+ R R +RG + R R +P P SR+PY R RR PR
Sbjct: 86 QPPPSGPGSKRGGRR--ERGGRVHGDSGRLRSRSPSPHEARSRSPYNDERSDRRSMSPR- 142
Query: 460 AWRWRSRDAPRTSRGP 413
+R RSR SR P
Sbjct: 143 -YRSRSRSPDGRSRSP 157
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.1 bits (67), Expect = 0.23
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 5/153 (3%)
Frame = +1
Query: 169 DNALDRAAMCEQQAXDANLRAEKAEEXARQLQKKIQTIENELDQTQESLMQ----VNGKL 336
DN A E + LR + E+ +Q+K E L+ E+ Q V ++
Sbjct: 941 DNVEVEAISIELERTKEKLRMAELEKS--NIQQKYLASEKTLEMMNETHEQFKHLVESEI 998
Query: 337 EEKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLE 516
+E+ + + SE+ LN+R++ A +L +A + D + +K E
Sbjct: 999 STREEKITSLRSELLDLNKRVEVLKEEKESSSKELA---KQLEDAVREKDSALSFKKDYE 1055
Query: 517 N-RSLADEERMDALENQLKEARFLAEEADKXYD 612
RS AD + +L+ +++ R L +E Y+
Sbjct: 1056 KIRSDADRV-ITSLKEDIEKERSLMKECHSNYE 1087
Score = 29.9 bits (64), Expect = 0.52
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 28/197 (14%)
Frame = +1
Query: 109 NKTTKMDAXKXXXQAXXLEXDNALDRAAMCEQQAX-DANL----RAEKAEEXARQLQKKI 273
NK ++ + +A E ++ D ++ A DA + E+ + + +K++
Sbjct: 1441 NKNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDAEQITKEQFEQLKSEKERTEKEL 1500
Query: 274 QTIENELDQTQESLMQVNGKLE----EKE------------KALQNAESEVAALNRRIQX 405
+NEL+ Q + +GK E EKE + +QN +E+AAL R
Sbjct: 1501 ADSKNELEHLQSEAVDADGKTEISNLEKEIHELRSDKEGLVQQVQNLSAELAAL--REHS 1558
Query: 406 XXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRS--LADEER-MDALENQLKE- 573
A ++L E+++ E E+ ++L RS +A++E+ + LENQL E
Sbjct: 1559 PTQGSLENADEIARLRSQL-ESTKQYYEKEKETEILAARSELVAEKEKTKEELENQLNEK 1617
Query: 574 ---ARFLAEEADKXYDE 615
+ L E+A K E
Sbjct: 1618 SQRIKELEEQAQKNSSE 1634
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 30.7 bits (66), Expect = 0.30
Identities = 38/204 (18%), Positives = 79/204 (38%), Gaps = 6/204 (2%)
Frame = +1
Query: 181 DRAAMCEQQAXDANLRAEKAEEXARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQ 360
DR A E+ D+ ++ EE +++ +I + + L+ + Q + K+
Sbjct: 245 DRIAALERNDDDSGAFIQR-EERIERIKAEITELNHSLELLRVEKQQNDEDYTNIMKSKV 303
Query: 361 NAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEE 540
E + + L+R+I+ + +K+SE E + + + +
Sbjct: 304 ALELQSSQLSRQIEFSKKDESSKLNILSELESKISEKENELSEILPKYNAIVSEADDLNK 363
Query: 541 RMDALENQL-----KEARFLAEEADKXYDE-VARKLAMVEADLXXXXXXXXXXXXKIVEL 702
R+ L+NQ K++R K DE + +L + ++ + E+
Sbjct: 364 RIMLLKNQKQSLLDKQSRTSQFTTKKERDEWIRNQLLQINRNINSTKENSDYLKTEYDEM 423
Query: 703 EEELRVVGNNLKSLEVSXEKAXQR 774
E EL+ + K +E+S E R
Sbjct: 424 ENELKAKLSRKKEIEISLESQGDR 447
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 30.3 bits (65), Expect = 0.39
Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 7/143 (4%)
Frame = +1
Query: 235 KAEEXARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQN----AESEVAALNRRIQ 402
K E + Q K+ ENE+++ + + L+++EK L+N E +LN R
Sbjct: 200 KREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLKVEEHEKSLNERAT 259
Query: 403 XXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKE--- 573
+ A + E N++ +E +++LE ++ +
Sbjct: 260 KLSEANENFNNRFKEFEEREKSAIKQNKEQSSEGSKTANQTHEQKELINSLEKKVSDIAL 319
Query: 574 ARFLAEEADKXYDEVARKLAMVE 642
+ L EEA + Y KLAMVE
Sbjct: 320 EKQLLEEAVERY-----KLAMVE 337
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 30.3 bits (65), Expect = 0.39
Identities = 25/160 (15%), Positives = 63/160 (39%), Gaps = 10/160 (6%)
Frame = +1
Query: 169 DNALDRAAMCEQQAXDANLRAEKAEEXARQLQKKIQTIENELDQTQESLMQVNGKLEEKE 348
D ++ + +A RAE AE ++++ ++ E E + +LEE E
Sbjct: 2 DKLREKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELE 61
Query: 349 KALQN----------AESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESER 498
+ + ++E L+R+++ T K+ + A+ ER
Sbjct: 62 EETKQLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFER 121
Query: 499 ARKVLENRSLADEERMDALENQLKEARFLAEEADKXYDEV 618
+ LE E++++ + ++ + + +E + +++
Sbjct: 122 RVQSLERERDDMEQKLEEMTDKYTKVKAELDEVHQALEDL 161
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 29.9 bits (64), Expect = 0.52
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 175 ALDRAAMCEQQAXDANL--RAEKAEEXARQLQKKIQTIENELDQTQESLMQVNGKLEEKE 348
A R+++ + N+ + + +E R+L+K + NE+ QESL + N L +
Sbjct: 618 ATSRSSILSHNSSAGNIDDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEM 677
Query: 349 KALQ 360
+A++
Sbjct: 678 EAIR 681
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 29.1 bits (62), Expect = 0.91
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Frame = +1
Query: 292 LDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLS-- 465
L +QE L+Q+N KLE+ + S L+++++ ++
Sbjct: 480 LSDSQEELLQLNAKLEKANIVIDELNSAKLKLSKQVEEESSMKDDLTEMNQRLKEQIESY 539
Query: 466 EASQAADESERARKVLENRSLADEERMDALENQLKEAR 579
E ++ + R K E E+ + L QLK AR
Sbjct: 540 ENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTAR 577
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 169 DNALDRAAMCEQQAXDANLRAEKAEEXARQLQKKIQTIENELDQTQESLMQVNGKLEEKE 348
DN L + E+ + ++ + + ++KI+ I +E D+ Q+ L +++ EEKE
Sbjct: 172 DNFLSSQTVHEENTAALDSEIDELMKQINEKEEKIEEISDETDKLQKLLRELD---EEKE 228
Query: 349 KALQNAESEVAALNR 393
K + LN+
Sbjct: 229 KVYAEEQEFYNNLNQ 243
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +1
Query: 217 ANLRAEKAEEXARQLQKKIQTIENELDQTQ--ESLMQVNGKLEEKEKALQNAESEV 378
A++ AEK+EE + + + + EN D+T+ +SL+ GK EE E ++ +++
Sbjct: 407 ASVGAEKSEETSNGNKSEQEEKENGNDETRSNDSLVSGKGKGEENEDSVFETRAKI 462
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 28.7 bits (61), Expect = 1.2
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 15/155 (9%)
Frame = +1
Query: 223 LRAEKAEEXARQLQKKIQTIENE---LDQTQESLMQVNG---KLEEKEKALQNAESEVAA 384
L ++ E A QL +Q +NE LD +S +VN +L++ K + ++E+A
Sbjct: 201 LTSKIRELQASQLDHDLQASQNESAGLDVNAKSA-EVNAILSELDDANKIIVELQAEIAV 259
Query: 385 L--NRRIQXXXXXXXXXXXXXATATAKLSEASQA-ADESERARKVLENRSLADEERMDAL 555
L N + Q + ++ + E E ++ + L
Sbjct: 260 LKQNTKEQKSGSSQDDLSNQQKQQLDFMDSLNKKLSTELESIKEASRKEMETHCATIQTL 319
Query: 556 ENQLKEARFLAEE----ADK--XYDEVARKLAMVE 642
EN++KEAR + EE A+K YDE+ R+L++++
Sbjct: 320 ENEVKEARKVKEESLTLANKFSDYDEIKRELSVLK 354
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/75 (26%), Positives = 27/75 (36%)
Frame = -3
Query: 571 PSADSRGRPCAPHPPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYV 392
P DS P + +AP + P P RD P T R P G +
Sbjct: 479 PPKDSSSTSTQPTEQSNAQQAPSPKEEERPLPSEPSQNQPAEYRDTPDTPRNIMPLPGLM 538
Query: 391 GSGQPLRTQRSAEPS 347
+ QP++ EPS
Sbjct: 539 SADQPIKV---TEPS 550
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/51 (21%), Positives = 34/51 (66%)
Frame = +1
Query: 235 KAEEXARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAAL 387
K +E LQ ++ + NEL ++++ + ++ K + +++++++ ESE++++
Sbjct: 141 KLKEENENLQDMLRNVGNELVESRDEIKELIEKQKVQKESVKSHESELSSV 191
Score = 27.1 bits (57), Expect = 3.7
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +1
Query: 178 LDRAAMCEQQAXDANLRAEKAEEXARQLQKKIQTIENELDQTQESLMQVNGK---LEEKE 348
LD AA+ + A + K ++ ++ + N+L++ + + K L+EK
Sbjct: 26 LDEAAITKPPASKKKRKNRKKKKNNGPSEQFVGN--NDLEEQRSGSIDSKDKEKPLDEKV 83
Query: 349 KALQNAESEVAALNRRIQ 402
K L+NA ++ L RRIQ
Sbjct: 84 KELENANKTLSDLVRRIQ 101
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 235 KAEEXARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKAL 357
K E R KI + D+T E + + G EE EKAL
Sbjct: 342 KISEIRRTSGSKISIAKEPHDETGERMFTITGTHEENEKAL 382
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 256 QLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNR 393
+LQK++QT+E E ++ +E L E+ L+ E+EV +L +
Sbjct: 624 ELQKRLQTLEEENNKAKEDSTSKTSNLLEQ---LKMTEAEVDSLRK 666
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.7
Identities = 29/109 (26%), Positives = 37/109 (33%)
Frame = -3
Query: 658 RAPSQPQPWPAYEQPHRXSCRPPQRGTWLPSADSRGRPCAPHPPTTCSRAPYVRARIHRR 479
R + P P P P PP LP G P AP P + AP + A +
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPM----GAPAAPPLPPSAPIAPPLPAGMPAA 466
Query: 478 PGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPLRTQRSAEPSPSLRA 332
P P A AP + P PA + + A S+RA
Sbjct: 467 PPLPPAA------PAPPPAPAPAPAAPVASIAELPQQDGRANLMASIRA 509
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 499 RARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPLRTQ 365
RAR H RP R + R + + A G PP+ + SG R +
Sbjct: 81 RARQHERPFRSRKSRRRKGKKAFSPRPGSPPSPSFYRSGSQKRAR 125
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 26.2 bits (55), Expect = 6.4
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +1
Query: 163 EXDNALDRAAMCEQQAXDANLRAEKAEEXARQLQKKIQTIENELDQTQESLMQVNGKLEE 342
E +N LD E++ A+ EK + L+ ++ ++ DQ+Q L++ +LE
Sbjct: 419 EMNNVLD-----EKEEISASSALEKLIKNNSCLEAELPSMYAAFDQSQSRLLKKYEELET 473
Query: 343 KEKALQNAESEVAALNRR 396
KEK E A ++
Sbjct: 474 KEKKALEMHYEKARATQK 491
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 26.2 bits (55), Expect = 6.4
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +1
Query: 109 NKTTKMDAXKXXXQAXXLEXDNALDRAAMCEQQAXDANLRAEKA--EEXARQLQKKIQTI 282
N + DA + Q E L + QA +L+ +A E R+L+KK + +
Sbjct: 412 NHPSSNDAEEQFKQNVVNEAKRYLQETIL-RLQAIPYHLQVGQAWTSESERELEKKKEQV 470
Query: 283 ENELDQTQESLMQVNGKLEEKEKALQNAESEVAA 384
E + QE LMQ LEE+ ++N + A
Sbjct: 471 EKK----QEELMQTRIVLEEQVFLVENMIEDAKA 500
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.125 0.316
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,326,251
Number of Sequences: 5004
Number of extensions: 38729
Number of successful extensions: 174
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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