Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_L13
(910 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 221 2e-56
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 200 4e-50
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 140 6e-32
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 134 2e-30
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 118 2e-25
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 116 8e-25
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 90 8e-17
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 87 6e-16
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 71 5e-11
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 62 1e-08
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 60 1e-07
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 60 1e-07
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 59 1e-07
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 57 5e-07
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 57 7e-07
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 54 4e-06
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 54 4e-06
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 54 4e-06
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 53 1e-05
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 53 1e-05
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 52 2e-05
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 51 4e-05
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 50 6e-05
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 50 8e-05
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 48 3e-04
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 48 4e-04
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 47 6e-04
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 45 0.002
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 45 0.003
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 45 0.003
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.007
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 43 0.009
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 42 0.016
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 42 0.022
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 42 0.022
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 41 0.038
UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1; Oltmannsiel... 40 0.12
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 39 0.20
UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375, ... 38 0.27
UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania h... 36 1.1
UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1; Ent... 34 4.4
UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=... 34 5.8
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 221 bits (540), Expect = 2e-56
Identities = 109/143 (76%), Positives = 113/143 (79%)
Frame = +3
Query: 87 MGXPRGXXXXXXXXXXXXXXXWAXXAFKQAHMGXQWKANPFGGASHAKGIVLEXVGVXAK 266
MG RG W +K+AH+G KANPFGGASHAKGIVLE VGV AK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 267 QPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 446
QPNSAIRKCVRVQLIK GKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 447 KVVKVANVSLLALYKEKKERPRS 515
KVVKVANVSLLALYK KKERPRS
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 200 bits (488), Expect = 4e-50
Identities = 95/142 (66%), Positives = 111/142 (78%)
Frame = +3
Query: 90 GXPRGXXXXXXXXXXXXXXXWAXXAFKQAHMGXQWKANPFGGASHAKGIVLEXVGVXAKQ 269
G PRG WA +K+ +G +K++PFGG+SHAKGIVLE +G+ +KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 270 PNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFK 449
PNSAIRKCVRVQLIK GKKVTAFVP DGCLN ++ENDEVL+AGFGRKG A GDIPGVRFK
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFK 123
Query: 450 VVKVANVSLLALYKEKKERPRS 515
VVKV+ VSLLAL+KEKKE+PRS
Sbjct: 124 VVKVSGVSLLALWKEKKEKPRS 145
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 140 bits (338), Expect = 6e-32
Identities = 67/121 (55%), Positives = 90/121 (74%), Gaps = 1/121 (0%)
Frame = +3
Query: 150 WAXXAFKQAHMGXQWKANPFGGASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKV 329
W +K+ +G K +P GA A+GIVLE VGV A++PN+A+RKCVRVQL+K GK V
Sbjct: 25 WNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVV 84
Query: 330 TAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKER 506
TAFVP DG LN+I E+DEV++ G +G ++GDIPGVRFKV+KV VSL A+++ KK++
Sbjct: 85 TAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIWRGKKQK 144
Query: 507 P 509
P
Sbjct: 145 P 145
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 134 bits (325), Expect = 2e-30
Identities = 65/121 (53%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
Frame = +3
Query: 150 WAXXAFKQAHMGXQWKANPFGGASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKV 329
W+ + + + KA+P GA AKGIVLE VGV AKQPNSAIRKC+R+QLIK G+++
Sbjct: 20 WSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCIRIQLIKNGRQI 79
Query: 330 TAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKER 506
TAF P DG +N I+E+DEV + G GR G + GDIPGVRF+V KV +VSL + K+++
Sbjct: 80 TAFCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVSLEEMVAGKRDK 139
Query: 507 P 509
P
Sbjct: 140 P 140
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 118 bits (284), Expect = 2e-25
Identities = 52/79 (65%), Positives = 62/79 (78%)
Frame = +3
Query: 150 WAXXAFKQAHMGXQWKANPFGGASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKV 329
WA A+K++H G +WK PF G+SHAKGIVLE +G+ AKQPNSAI KC RVQL+K GKK+
Sbjct: 93 WADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAICKCARVQLVKNGKKI 151
Query: 330 TAFVPRDGCLNHIEENDEV 386
AFVP DGCLN I+EN V
Sbjct: 152 AAFVPNDGCLNFIKENGPV 170
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 116 bits (279), Expect = 8e-25
Identities = 57/100 (57%), Positives = 67/100 (67%)
Frame = -1
Query: 523 YTYDLGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSR 344
Y YDLG SFFS +A ++T T TTL TPG+SP A PL P PA TSSFSS F+QPS
Sbjct: 3 YIYDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSF 62
Query: 343 GTNAVTFFPXLMSCTRTHLRMAELGCLAXTPTXSRTMPFA 224
GT AVTF P L++ T TH +AE GCL P S+T+P A
Sbjct: 63 GTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 89.8 bits (213), Expect = 8e-17
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = +3
Query: 378 DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 515
DEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 87.0 bits (206), Expect = 6e-16
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = +3
Query: 291 CVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVAN 467
CVRVQL K GK VTAFVP DG LN I E+DEV++ G +G A GD+PGVRFKV KV
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNG 645
Query: 468 VSLLALYKEKKERP 509
VSL A+ KK++P
Sbjct: 646 VSLKAILLGKKQKP 659
Score = 54.0 bits (124), Expect = 5e-06
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +3
Query: 150 WAXXAFKQAHMGXQWKANPFGGASHAKGIVLEXVGVXAKQPNSAIRKCV 296
W+ +K+ +G K +P GA A+GIVLE VGV A++PN+A+RKCV
Sbjct: 25 WSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCV 73
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 70.5 bits (165), Expect = 5e-11
Identities = 38/113 (33%), Positives = 61/113 (53%)
Frame = -3
Query: 488 VESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*YXXXXXXXX*ATVTGDECGHFLSVLN 309
++S++R++GYF HLK +S ++T +TF+T+S + + A + G E L VLN
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDLLPVLN 67
Query: 308 ELYTDAFADGRVGLLSXYTNXLEDDALCVRCTTERVSLPLRTHVGLLEXXXRP 150
EL+ DA DGR+ L + ++LC+R +R+ L VG L P
Sbjct: 68 ELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLVLFVMP 120
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 62.5 bits (145), Expect = 1e-08
Identities = 38/86 (44%), Positives = 56/86 (65%)
Frame = +3
Query: 201 NPFGGASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEEND 380
NPF GA AKG+VL+ + K+PNSA RKCV V+L GK++TA++P G ++++E++
Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIP--GIGHNLQEHN 139
Query: 381 EVLVAGFGRKGHAVGDIPGVRFKVVK 458
VL R G D+PGV+ K V+
Sbjct: 140 IVLC----RVGRC-RDVPGVKIKCVR 160
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 59.7 bits (138), Expect = 1e-07
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +3
Query: 204 PFGGASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDE 383
P G KG+VL+ + K+PNSA RKC RV+L GK+V F+P +G ++++E++
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG--HNLQEHNI 118
Query: 384 VLVAGFGRKGHAVGDIPGVRFKVVK 458
VLV G GR D+PGV+ K+V+
Sbjct: 119 VLVEG-GR----TQDLPGVKLKIVR 138
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 59.7 bits (138), Expect = 1e-07
Identities = 36/90 (40%), Positives = 56/90 (62%)
Frame = +3
Query: 195 KANPFGGASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEE 374
KA G +G+ + V K+PNSA+RK RV+L G +VTA++P +G ++++E
Sbjct: 20 KAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNLQE 76
Query: 375 NDEVLVAGFGRKGHAVGDIPGVRFKVVKVA 464
+ VLV G GR V D+PGVR+K+++ A
Sbjct: 77 HSIVLVRG-GR----VKDLPGVRYKIIRGA 101
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 59.3 bits (137), Expect = 1e-07
Identities = 38/94 (40%), Positives = 57/94 (60%)
Frame = +3
Query: 177 HMGXQWKANPFGGASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGC 356
H+ + NP G AKG+VL+ V K+PNSA RKCV V+L GK++ A++P G
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 69
Query: 357 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 458
++++E++ VLV GR + D PGV+ K V+
Sbjct: 70 GHNLQEHNVVLVR-VGR----LKDCPGVKLKCVR 98
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 57.2 bits (132), Expect = 5e-07
Identities = 32/79 (40%), Positives = 54/79 (68%)
Frame = +3
Query: 228 KGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 407
+G++L + + K+PNSA+RKC RV+L GK ++A +P +G ++++E+ VLV G GR
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRG-GR 145
Query: 408 KGHAVGDIPGVRFKVVKVA 464
V D+PGV++ +V+ A
Sbjct: 146 ----VQDVPGVKYHLVRGA 160
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 56.8 bits (131), Expect = 7e-07
Identities = 35/119 (29%), Positives = 59/119 (49%)
Frame = -3
Query: 542 QVTYHNVHL*SWSLLFLFVESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*YXXXXXXX 363
Q++Y L W + F+ + R+ G F L+ ++ +++D V+ ++E
Sbjct: 3 QISYQQSALLDWLVFFVSPKCVNRNSGNFDDLEPDTRHISDSVSLSSEVLDENFVVIFCE 62
Query: 362 X*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSXYTNXLEDDALCVRCTTERVSLPLR 186
TV+ +E HFL VL EL++DA ++G V LL + DDA C +E + L R
Sbjct: 63 SKTTVSWNESSHFLVVLFELHSDALSNGCVWLLGFDCDLFYDDACCAWSNSEWLILGSR 121
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 54.4 bits (125), Expect = 4e-06
Identities = 33/94 (35%), Positives = 57/94 (60%)
Frame = +3
Query: 177 HMGXQWKANPFGGASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGC 356
H+ + P G AKG+VL+ + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 112
Query: 357 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 458
++++E++ +++ GR + D+PGV+ K V+
Sbjct: 113 GHNLQEHN-IVLCRVGR----LQDVPGVKLKAVR 141
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 54.4 bits (125), Expect = 4e-06
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +3
Query: 213 GASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLV 392
G K + + ++PNSA+RK RV+L G+ TA++P +G ++++E+ VLV
Sbjct: 77 GCFQKKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPGEG--HNLQEHSVVLV 133
Query: 393 AGFGRKGHAVGDIPGVRFKVVK 458
G G K D+PGVR+K+V+
Sbjct: 134 RGGGAK-----DLPGVRYKIVR 150
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 54.4 bits (125), Expect = 4e-06
Identities = 33/94 (35%), Positives = 57/94 (60%)
Frame = +3
Query: 177 HMGXQWKANPFGGASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGC 356
H+ + P G AKG+VL+ + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 357 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 458
++++E++ +++ GR + D+PGV+ K V+
Sbjct: 99 GHNLQEHN-IVLCRVGR----LQDVPGVKLKAVR 127
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 52.8 bits (121), Expect = 1e-05
Identities = 35/88 (39%), Positives = 49/88 (55%)
Frame = +3
Query: 195 KANPFGGASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEE 374
K P G KG+VL K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 375 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 458
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 52.8 bits (121), Expect = 1e-05
Identities = 34/77 (44%), Positives = 50/77 (64%)
Frame = +3
Query: 228 KGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 407
+GI L V K+PNSA+RK RV+L G +VTA++P G ++++E+ VLV G GR
Sbjct: 31 RGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNLQEHAVVLVRG-GR 86
Query: 408 KGHAVGDIPGVRFKVVK 458
V D+PGVR+ +V+
Sbjct: 87 ----VKDLPGVRYHIVR 99
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 52.0 bits (119), Expect = 2e-05
Identities = 33/94 (35%), Positives = 55/94 (58%)
Frame = +3
Query: 177 HMGXQWKANPFGGASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGC 356
H+ + P G KG+VL+ + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 116
Query: 357 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 458
++++E++ +++ GR V D PGV+ K V+
Sbjct: 117 GHNLQEHN-IVLCRVGR----VQDCPGVKIKCVR 145
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 51.2 bits (117), Expect = 4e-05
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +3
Query: 378 DEVLVAGFGRKGHAVGDIPGVRFKVVK 458
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 50.4 bits (115), Expect = 6e-05
Identities = 33/115 (28%), Positives = 48/115 (41%)
Frame = -3
Query: 416 VTFTTESRH*YXXXXXXXX*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSXYTNXLED 237
+TF+T+S + A + G E L VLNEL+ DA DGR+ L +
Sbjct: 1 MTFSTKSSNQNFIIFLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQH 60
Query: 236 DALCVRCTTERVSLPLRTHVGLLEXXXRPAXCTTXVHVLTRRAXAXGXTHLESTT 72
++LC+R T +R+ L VG L P + L + HL T
Sbjct: 61 NSLCMRGTPKRIGLQGCAQVGFLVLFVMPLLVPSVTAELPGSSETTTLAHLAGAT 115
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 50.0 bits (114), Expect = 8e-05
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +3
Query: 213 GASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLV 392
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G ++++E+ +VLV
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128
Query: 393 AGFGRK 410
G GR+
Sbjct: 129 KG-GRR 133
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 48.0 bits (109), Expect = 3e-04
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = +3
Query: 213 GASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLV 392
G+ +G+ V K+PNSA+RK RV+L G+ VTA++P G ++ +E+ VL+
Sbjct: 47 GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIP--GIGHNAQEHAVVLL 103
Query: 393 AGFGRKGHAVGDIPGVRFKVVK 458
G GR D PGV++ VV+
Sbjct: 104 RG-GR----AQDCPGVQYHVVR 120
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 47.6 bits (108), Expect = 4e-04
Identities = 25/77 (32%), Positives = 52/77 (67%)
Frame = +3
Query: 228 KGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 407
KG+ ++ K+PNSA+RK +++L K K++ A++P +G + +++++ VL+ +
Sbjct: 29 KGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYIPGEG--HALQDHNFVLI----K 81
Query: 408 KGHAVGDIPGVRFKVVK 458
KG V D+PG+++KV++
Sbjct: 82 KGR-VQDLPGIKYKVIR 97
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 47.2 bits (107), Expect = 6e-04
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +3
Query: 228 KGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 407
KG+VL + + K+PNSA RK RV+L G V+A++P +G + +E+ V V G GR
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRLTN-GNVVSAYIPGEG--HDAQEHSIVYVRG-GR 114
Query: 408 KGHAVGDIPGVRFKVVKVA 464
D+PGV++ V++ A
Sbjct: 115 ----CQDLPGVKYHVIRGA 129
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +3
Query: 264 KQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 443
K+PNSA+RK ++ L K K V A+VP + + I +N VL+ KG V D+PGV+
Sbjct: 43 KKPNSAVRKVIKTTLNK--KTVLAYVPGENVI--IPKNSRVLI-----KGGNVPDLPGVK 93
Query: 444 FKVV 455
+KV+
Sbjct: 94 YKVI 97
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 45.2 bits (102), Expect = 0.002
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +3
Query: 264 KQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 443
K+PNS RK RV+L GK +TA++P +G ++I+++ VLV G GR D PGVR
Sbjct: 56 KKPNSGERKTARVRL-STGKVITAYIPGEG--HNIQQHSVVLVRG-GRS----QDCPGVR 107
Query: 444 FKVVKVA 464
+ +V+ A
Sbjct: 108 YHLVRGA 114
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 44.8 bits (101), Expect = 0.003
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +3
Query: 213 GASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLV 392
G KG+ ++ V K+PNSA RK +++L + + A++P G ++++E VLV
Sbjct: 26 GCPQKKGVCVKLRIVKPKKPNSAQRKVAKLRL-STRRMIIAYIPGQG--HNLQEYSSVLV 82
Query: 393 AGFGRKGHAVGDIPGVRFKVVK 458
+G GR D+PGVR+ ++K
Sbjct: 83 SG-GR----APDLPGVRYTLIK 99
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 44.8 bits (101), Expect = 0.003
Identities = 31/87 (35%), Positives = 49/87 (56%)
Frame = +3
Query: 195 KANPFGGASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEE 374
++NPF G+ L V K+PNSA+RK V+L + V A++P G + ++E
Sbjct: 25 ESNPF-----KSGVCLVVKTVTPKKPNSALRKIATVRL-SNKRTVNAYIP--GEKHSVKE 76
Query: 375 NDEVLVAGFGRKGHAVGDIPGVRFKVV 455
+D VLV +G V D+PGV++ +V
Sbjct: 77 HDRVLV-----RGGQVPDLPGVKYHIV 98
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 43.6 bits (98), Expect = 0.007
Identities = 26/77 (33%), Positives = 46/77 (59%)
Frame = +3
Query: 228 KGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 407
KG+ ++ K+PNSA RKC ++L GK ++A++P G ++E+ V+ G GR
Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYIP--GERGQLQEHGVVIFEG-GR 91
Query: 408 KGHAVGDIPGVRFKVVK 458
V D PG+++K+++
Sbjct: 92 ----VQDCPGIKYKIIR 104
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 43.2 bits (97), Expect = 0.009
Identities = 33/95 (34%), Positives = 51/95 (53%)
Frame = +3
Query: 228 KGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 407
KGI ++ K+PNSA RK +V L GK + ++ +G + ++E+ VLV G GR
Sbjct: 31 KGICMKVYTTSPKKPNSAERKVAKVNLTN-GKSIIGYISGEG--HTLQEHSLVLVRG-GR 86
Query: 408 KGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPR 512
V D+PGV++ V+ L A+ KK R +
Sbjct: 87 ----VKDLPGVQYHFVR-GVYDLHAVGTRKKSRSK 116
>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 208
Score = 42.3 bits (95), Expect = 0.016
Identities = 28/78 (35%), Positives = 43/78 (55%)
Frame = +3
Query: 213 GASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLV 392
G KG+ L+ K+PNS RK R++L G VT ++P +G ++I+++ VL+
Sbjct: 105 GRPQMKGVCLKTGITKPKKPNSGERKTARIRLTN-GAVVTGYIPGEG--HNIQQHSVVLI 161
Query: 393 AGFGRKGHAVGDIPGVRF 446
G GR D PGVR+
Sbjct: 162 RG-GR----AQDCPGVRY 174
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 41.9 bits (94), Expect = 0.022
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +3
Query: 213 GASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLV 392
G KG+ + V ++PNS +RK RV+L G+ VT VP +G +++ + VLV
Sbjct: 127 GCPQKKGVCVTIRVVTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG--HNLHTHSVVLV 183
Query: 393 AGFGRKGHAVGDIPGVRFKVVK 458
G GR D+ G +KVV+
Sbjct: 184 RG-GR----CQDVSGCHYKVVR 200
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 41.9 bits (94), Expect = 0.022
Identities = 26/76 (34%), Positives = 45/76 (59%)
Frame = +3
Query: 231 GIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGRK 410
G+ L K+PNSA+RK +V+L + A++P +G ++++E+ VL+ G GR
Sbjct: 32 GVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRG-GR- 86
Query: 411 GHAVGDIPGVRFKVVK 458
V D+PGV+F ++
Sbjct: 87 ---VKDLPGVKFHCIR 99
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 41.1 bits (92), Expect = 0.038
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = +3
Query: 210 GGASHAKGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVL 389
G +G+ L K+PNSA+ K +V+L V A++P +G ++++E+ VL
Sbjct: 88 GKCPQKQGVCLRVSTRTPKKPNSALGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVL 144
Query: 390 VAGFGRKGHAVGDIPGVRFKVVK 458
V G GR V D+PGV+F ++
Sbjct: 145 VRG-GR----VKDLPGVKFHCIR 162
>UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S12 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 127
Score = 39.5 bits (88), Expect = 0.12
Identities = 29/83 (34%), Positives = 46/83 (55%)
Frame = +3
Query: 264 KQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 443
K+PNSA+RK +V+L K T V G ++++E+ +L G GR V D+PGV+
Sbjct: 46 KKPNSALRKVAKVRL---SNKTTVIVAIPGEGHNLKEHAIILFRG-GR----VRDLPGVK 97
Query: 444 FKVVKVANVSLLALYKEKKERPR 512
+K V+ + L + K K R +
Sbjct: 98 YKAVR-GVLDLAGVQKRKTARSK 119
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 38.7 bits (86), Expect = 0.20
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = +3
Query: 228 KGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 407
+G + + + K+PNSA RK ++L K KK+ A++P G + + + VL+ G
Sbjct: 28 EGFLCSIISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIP--GERSVVRDKTRVLIRGGNT 84
Query: 408 KGHAVGDIPGVRFKVV 455
+ D+PGV K+V
Sbjct: 85 R-----DLPGVNHKIV 95
>UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1375, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 915
Score = 38.3 bits (85), Expect = 0.27
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = +3
Query: 264 KQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 443
K+ NSA+RK RV+L G ++T ++P G ++ +E+ VLV G GR V D+P VR
Sbjct: 176 KKSNSALRKVARVRLTS-GFEITTYIP--GIGHNSQEHFVVLVRG-GR----VKDLPNVR 227
Query: 444 FKVVK 458
+ +V+
Sbjct: 228 YHIVR 232
>UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania
huxleyi|Rep: Ribosomal protein S12 - Emiliania huxleyi
Length = 124
Score = 36.3 bits (80), Expect = 1.1
Identities = 28/93 (30%), Positives = 48/93 (51%)
Frame = +3
Query: 228 KGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 407
K I L+ + + K+PNSA R+ +V+ +K +T +P G ++++++ VL+ G GR
Sbjct: 32 KVICLKVLTISPKKPNSANRRIAKVKTLKQPTFLTVKIP--GEKHNLQQHSTVLICG-GR 88
Query: 408 KGHAVGDIPGVRFKVVKVANVSLLALYKEKKER 506
D+ GV K V+ LL + K R
Sbjct: 89 S----KDLIGVHLKAVR-GKFDLLGVNGRKSSR 116
>UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ankyrin repeat
protein - Entamoeba histolytica HM-1:IMSS
Length = 681
Score = 34.3 bits (75), Expect = 4.4
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +3
Query: 309 IKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 488
IK + V+ F+P + L ++ N+ V V +KG AVG I G R+ + +A +++ L
Sbjct: 544 IKKVRMVSDFMPEEEELLRLKSNEIVEVYWEHKKGWAVGGING-RYGMFPLAKGTIIPLS 602
Query: 489 KEKKERPRS 515
KE++++ S
Sbjct: 603 KEEQDKINS 611
>UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=7;
Oligohymenophorea|Rep: Mitochondrial ribosomal protein
S12 - Paramecium tetraurelia
Length = 139
Score = 33.9 bits (74), Expect = 5.8
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +3
Query: 228 KGIVLEXVGVXAKQPNSAIRKCVRVQLIKXGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 407
+G VL+ V K+PNSA R + +L K V A +P G +++ ++ +LV G G
Sbjct: 31 EGSVLKPRIVTPKKPNSARRPVAKAKLTNK-KFVVAHIPGTG--HNLRKHSTILVRGGGC 87
Query: 408 KGHAVGDIPGVRFKVVK 458
+ D+PGVR ++
Sbjct: 88 R-----DLPGVRHTCIR 99
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,607,664
Number of Sequences: 1657284
Number of extensions: 10975717
Number of successful extensions: 24547
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 23641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24452
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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