Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_L11
         (905 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019928-1|AAH19928.1|  201|Homo sapiens LPHN1 protein protein.        31   7.6  
AK022001-1|BAB13950.1|  201|Homo sapiens protein ( Homo sapiens ...    31   7.6  

>BC019928-1|AAH19928.1|  201|Homo sapiens LPHN1 protein protein.
          Length = 201

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = -3

Query: 792 AEGRPIRKP--PXPARWPIH*CRKNLPHLPLNLKHK 691
           A G P   P  P P RWP+H C    P L  +  HK
Sbjct: 121 APGHPSPAPALPFPQRWPLHLCSDLSPSLCPSFSHK 156


>AK022001-1|BAB13950.1|  201|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11939 fis, clone HEMBB1000592. ).
          Length = 201

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = -3

Query: 792 AEGRPIRKP--PXPARWPIH*CRKNLPHLPLNLKHK 691
           A G P   P  P P RWP+H C    P L  +  HK
Sbjct: 121 APGHPSPAPALPFPQRWPLHLCSDLSPSLCPSFSHK 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,766,882
Number of Sequences: 237096
Number of extensions: 1577880
Number of successful extensions: 2722
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2690
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)