Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_L10
(1095 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 40 0.003
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 39 0.005
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 39 0.005
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.16
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.16
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 33 0.36
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.36
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.36
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.36
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 33 0.47
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 33 0.47
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 33 0.47
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.47
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.47
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.47
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 32 0.63
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 1.9
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 31 1.9
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 3.3
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 4.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 29 5.8
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 5.8
AL110499-3|CAE18038.1| 437|Caenorhabditis elegans Hypothetical ... 29 5.8
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 29 7.7
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 7.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 7.7
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 7.7
AF099003-1|AAC68742.1| 440|Caenorhabditis elegans Hypothetical ... 29 7.7
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 39.9 bits (89), Expect = 0.003
Identities = 26/77 (33%), Positives = 27/77 (35%), Gaps = 3/77 (3%)
Frame = +3
Query: 708 PXXQXAXPXPLXXLPXPPXXXVXCPXPARPMPDXHHAXPFLSXL---LPXHTTXLXRPXP 878
P Q A P P L P V P P P P HA P + P H P
Sbjct: 71 PYPQHAVPAPAPPLASYPQNAVPVPAPP-PAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQ 129
Query: 879 XLTPPPXCPPXRXPPSP 929
PPP PP PP P
Sbjct: 130 QQPPPPPPPPHYPPPPP 146
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Frame = +1
Query: 643 PAXHPXPPHXXXXSTXPPXTXGPPPXRPHP---XXSPXSPXLPXPXSXAP 783
P P P S P T PPP P+P +P P P P P
Sbjct: 29 PPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVP 78
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 634 VDXPAXHPXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXP 768
V PA P P P PPP P P P P P P
Sbjct: 107 VPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPP 151
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 39.1 bits (87), Expect = 0.005
Identities = 28/90 (31%), Positives = 33/90 (36%), Gaps = 5/90 (5%)
Frame = -3
Query: 937 AXXGEGGXRXGGHXGGGVRXGXGR---XRXVVXXGRXXERKGXAWWXSGIGRAG--XGQX 773
A G GG GG+ GG G G+ G ++ G W G G G G
Sbjct: 202 AYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQ 261
Query: 772 TXXXGGXGSXXXGKGXAXWXXGQXWXEGGW 683
GG G G G W GQ +GGW
Sbjct: 262 QQQQGGWGGPQQGGGGGGW-GGQGQQQGGW 290
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 39.1 bits (87), Expect = 0.005
Identities = 28/90 (31%), Positives = 33/90 (36%), Gaps = 5/90 (5%)
Frame = -3
Query: 937 AXXGEGGXRXGGHXGGGVRXGXGR---XRXVVXXGRXXERKGXAWWXSGIGRAG--XGQX 773
A G GG GG+ GG G G+ G ++ G W G G G G
Sbjct: 240 AYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQ 299
Query: 772 TXXXGGXGSXXXGKGXAXWXXGQXWXEGGW 683
GG G G G W GQ +GGW
Sbjct: 300 QQQQGGWGGPQQGGGGGGW-GGQGQQQGGW 328
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.16
Identities = 18/72 (25%), Positives = 20/72 (27%)
Frame = +1
Query: 643 PAXHPXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXPXSXAPXXXXXXXXXXXXX 822
P P PP PP PP P P P P P P P
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 340
Query: 823 LSFLXSFPXTPP 858
+ + P PP
Sbjct: 341 MRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.16
Identities = 18/72 (25%), Positives = 20/72 (27%)
Frame = +1
Query: 643 PAXHPXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXPXSXAPXXXXXXXXXXXXX 822
P P PP PP PP P P P P P P P
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 350
Query: 823 LSFLXSFPXTPP 858
+ + P PP
Sbjct: 351 MRYPGGMPPPPP 362
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 33.1 bits (72), Expect = 0.36
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +1
Query: 643 PAXHPXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXPXSXAP 783
P P PP + P + PPP PHP LP P + P
Sbjct: 125 PPPVPHPPQITQMAPILPTSPAPPPPIPHPPQRAQMNCLPLPQTFQP 171
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.36
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 661 PPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXP 768
PP PP + GPPP P P P P P P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +1
Query: 682 STXPPXTXGPPPXRPHPXXSPXSPXLPXPXSXAPXXXXXXXXXXXXXLSFLXSFPXTPP 858
S PP T GPPP P + P P P P L + P PP
Sbjct: 704 SALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 661 PPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXP 768
PP PP T GPPP P P S P P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.36
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 661 PPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXP 768
PP PP + GPPP P P P P P P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +1
Query: 682 STXPPXTXGPPPXRPHPXXSPXSPXLPXPXSXAPXXXXXXXXXXXXXLSFLXSFPXTPP 858
S PP T GPPP P + P P P P L + P PP
Sbjct: 704 SALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 661 PPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXP 768
PP PP T GPPP P P S P P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.36
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 661 PPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXP 768
PP PP + GPPP P P P P P P
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +1
Query: 682 STXPPXTXGPPPXRPHPXXSPXSPXLPXPXSXAPXXXXXXXXXXXXXLSFLXSFPXTPP 858
S PP T GPPP P + P P P P L + P PP
Sbjct: 287 SALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 661 PPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXP 768
PP PP T GPPP P P S P P
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.7 bits (71), Expect = 0.47
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = +3
Query: 750 PXPPXXXVXCPXPARPMPDXHHAXPFLSXLLPXHTTXLXRPXPXLTPPPXCPPXRXPPSP 929
P PP C P P P P P + P P PPP CPP PP P
Sbjct: 29 PCPPPPPPMCAPPPLPCPPPPICPPQFCPPPP-----MCPPPPPPPPPPMCPPP-PPPMP 82
Score = 31.9 bits (69), Expect = 0.83
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 643 PAXHPXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXP 768
P P PP PP PPP P P SP P P
Sbjct: 53 PQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQSYAPAP 94
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 717 QXAXPXPLXXLPXPPXXXVXCPXPARPMP 803
Q P P+ P PP CP P PMP
Sbjct: 54 QFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 655 PXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXPXSXAP 783
P PP PP PPP P P P P P P P
Sbjct: 29 PCPPPPPPMCAPPPLPCPPPPICP-PQFCPPPPMCPPPPPPPP 70
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 643 PAXHPXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXPXSXAP 783
P P P PP PPP P P P P P P P
Sbjct: 36 PMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
Score = 29.1 bits (62), Expect = 5.8
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +3
Query: 780 PXPARPMPDXHHAXPFLSXLLPXHTTXLXRPXPXLTPPPXCPPXRXPPSP 929
P P P P A P L P P PPP CPP PP P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPIC-----PPQFCPPPPMCPPPPPPPPP 71
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 32.7 bits (71), Expect = 0.47
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +3
Query: 786 PARPMPDXHHAXPFLSXLLPXHTTXLXRPXP-XLTPPPXCPPXRXPPSP 929
P MP H PF+ P H L P P L PPP P P P
Sbjct: 60 PPSTMPPGPHGMPFMGGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPP 108
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 655 PXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSP 753
P P H PP GPPP PH P P
Sbjct: 77 PPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPP 109
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 32.7 bits (71), Expect = 0.47
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 643 PAXHPXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSP 753
P P PP+ PP PPP P P +P +P
Sbjct: 119 PGGVPAPPNPPRTCCPPPTPAAPPPPPPPPPPAPEAP 155
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.47
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 643 PAXHPXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXP 768
P P PP + PP G PP P P SP + LP P
Sbjct: 276 PTGSPPPP--PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.47
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 643 PAXHPXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXP 768
P P PP + PP G PP P P SP + LP P
Sbjct: 297 PTGSPPPP--PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.47
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 643 PAXHPXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXP 768
P P PP + PP G PP P P SP + LP P
Sbjct: 282 PTGSPPPP--PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 32.3 bits (70), Expect = 0.63
Identities = 23/84 (27%), Positives = 29/84 (34%), Gaps = 6/84 (7%)
Frame = -3
Query: 922 GGXRXGGHXGGGVRXGXGRXRXVVXXGRXXERKG-----XAWWXSGIGRAGXGQ-XTXXX 761
GG + G GGG R G G+ + G W + G+ G G+
Sbjct: 187 GGGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGGRGGQQGP 246
Query: 760 GGXGSXXXGKGXAXWXXGQXWXEG 689
GG G G G W G W G
Sbjct: 247 GGWGGGGRGGGWGGWGRGSRWGWG 270
Score = 28.7 bits (61), Expect = 7.7
Identities = 23/85 (27%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Frame = -3
Query: 928 GEGGXRXGGHXGGGVRXGXGRXRXVVXXGRXXERKGXAWWXSGIGRAGXG---QXTXXXG 758
G G GG GG G G + G G + SG G+ G G G
Sbjct: 87 GSGSGGWGGQDGGSSAGGWGGSQGGSQGGSSGGWGGSSRSDSGSGQGGWGGQQGGNSNAG 146
Query: 757 GXGSXXXGKGXAXWXXGQXWXEGGW 683
G G G+ G +GGW
Sbjct: 147 GWGGSQGGQNGGGGRGGSG-GQGGW 170
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 643 PAXHPXPPHXXXXSTXPPXTXGPPPXRPHP 732
P HP H + PP + PPP + HP
Sbjct: 56 PYEHPAQQHPPQHHSVPPNSFAPPPGQHHP 85
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 30.7 bits (66), Expect = 1.9
Identities = 20/93 (21%), Positives = 27/93 (29%), Gaps = 5/93 (5%)
Frame = +1
Query: 634 VDXPAXHPXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLP-----XPXSXAPXXXXX 798
+ P+ HP P PP P PH SP P P P
Sbjct: 128 IPGPSQHPATPSYYIQHPPPPSMSNGAPYYPHMNPSPYYQPRPNYVTQPPAPIIPPPQPP 187
Query: 799 XXXXXXXXLSFLXSFPXTPPXSXAPHLXSRHPL 897
++ P PP P L ++ P+
Sbjct: 188 VMTASAAAAAYRDRLPPPPPKPPMPDLRTKEPI 220
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.9 bits (64), Expect = 3.3
Identities = 23/82 (28%), Positives = 27/82 (32%)
Frame = -3
Query: 928 GEGGXRXGGHXGGGVRXGXGRXRXVVXXGRXXERKGXAWWXSGIGRAGXGQXTXXXGGXG 749
G+GG GG GGG+ G G G + G G G G GG G
Sbjct: 95 GQGGYGGGGDFGGGM-GGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYG 153
Query: 748 SXXXGKGXAXWXXGQXWXEGGW 683
G G G GG+
Sbjct: 154 GGGGGGGDFGGYGGGGMGGGGY 175
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 29.5 bits (63), Expect = 4.4
Identities = 21/69 (30%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Frame = +3
Query: 723 AXPXPLXXLPXP--PXXXVXCPXPARPMPDXHHAXPFLSXLLPXHTTXLXRPXPXLTPPP 896
A P P P P P + P PARP P P + P RP P + P
Sbjct: 180 ARPTPYIERPVPARPAPYIERPEPARPAPYIERPVP--ARPAPYIEPTPARPAPYIEPST 237
Query: 897 XCPPXRXPP 923
P R P
Sbjct: 238 AKPQPRPQP 246
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/60 (30%), Positives = 20/60 (33%)
Frame = +3
Query: 750 PXPPXXXVXCPXPARPMPDXHHAXPFLSXLLPXHTTXLXRPXPXLTPPPXCPPXRXPPSP 929
P PP P P P P P ++ P P P PP PP PP P
Sbjct: 140 PPPPPRVPRTPPPRSPPP----RRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPP 195
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/46 (28%), Positives = 15/46 (32%)
Frame = +1
Query: 646 AXHPXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXPXSXAP 783
A HP P H P P P+P P P P + P
Sbjct: 37 ASHPQPTHPSAPQDPSPAVPSTPVRVPYPTAPPPIPPAPEAVTAGP 82
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 655 PXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXP 768
P PP PP PPP P P P P +P P
Sbjct: 55 PPPPPCPAQFCPPPPICPPPPPPPMP-CPPPPPPMPRP 91
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 870 PXPXLTPPPXCPPXRXPPSP 929
P PPP CPP PP P
Sbjct: 61 PAQFCPPPPICPPPPPPPMP 80
>AL110499-3|CAE18038.1| 437|Caenorhabditis elegans Hypothetical
protein Y62F5A.10 protein.
Length = 437
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 132 RPXKRLHHYFWNSSRGHDGRPRRSAINKKKXLSEGE 25
+P K HH+ + +G P++S N+KK ++ E
Sbjct: 7 KPKKHQHHHHHHHQKGSVALPKKSKNNRKKKITRKE 42
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 28.7 bits (61), Expect = 7.7
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -1
Query: 786 GRGXGRGXXEGXGAXXXXRVXPXGXXAXCGGRXGG 682
GRG RG G G+ R P G GG GG
Sbjct: 80 GRGSPRGGFGGRGSPRGGRGSPRGGRGGAGGMRGG 114
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 7.7
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 5/50 (10%)
Frame = +1
Query: 634 VDXPAXHPXPPHXXXXSTX----PPXTXG-PPPXRPHPXXSPXSPXLPXP 768
+ P P PPH PP T PPP P P S +P P P
Sbjct: 764 IPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 7.7
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 5/50 (10%)
Frame = +1
Query: 634 VDXPAXHPXPPHXXXXSTX----PPXTXG-PPPXRPHPXXSPXSPXLPXP 768
+ P P PPH PP T PPP P P S +P P P
Sbjct: 764 IPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.7 bits (61), Expect = 7.7
Identities = 23/65 (35%), Positives = 24/65 (36%)
Frame = -3
Query: 922 GGXRXGGHXGGGVRXGXGRXRXVVXXGRXXERKGXAWWXSGIGRAGXGQXTXXXGGXGSX 743
GG GG GGG G G GR +R G W G G G G GG G
Sbjct: 213 GGSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGG---WGGGGGGRGYG----GGGGGGGY 265
Query: 742 XXGKG 728
G G
Sbjct: 266 GYGGG 270
>AF099003-1|AAC68742.1| 440|Caenorhabditis elegans Hypothetical
protein Y59C2A.2 protein.
Length = 440
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/42 (28%), Positives = 15/42 (35%)
Frame = +1
Query: 643 PAXHPXPPHXXXXSTXPPXTXGPPPXRPHPXXSPXSPXLPXP 768
P P H PP PP P+P + +P P P
Sbjct: 16 PVIQEPPEHILAQLQNPPEPENPPQNAPNPRGNAQNPPNPPP 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,000,964
Number of Sequences: 27780
Number of extensions: 200639
Number of successful extensions: 1542
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2950351116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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