Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_L09
(925 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.008
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.008
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.008
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 35 0.094
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.22
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.22
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.22
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 32 0.67
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.67
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 32 0.67
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.7
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 25 4.3
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 4.7
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 4.7
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 4.7
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 6.2
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 6.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 28 8.2
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 28 8.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.3 bits (85), Expect = 0.008
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXGG 397
PP GG PPP GGPPPPP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPG 733
Score = 35.9 bits (79), Expect = 0.041
Identities = 26/85 (30%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Frame = +1
Query: 397 PPXGGGGGPPXXXXPXXXG-XPPPXXGGXKNFFXGKXXXPXFFXXPPXXXKXXXPPPGXF 573
PP GG PP P G PPP GG G P PP PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 574 FFFSXXXGGGGGXFXXKXTPPPXGG 648
G F PPP G
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXX---GGPPPPPXGG 397
PP GG PPP GGPPPPP G
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = -2
Query: 477 PPXXGG---GXPPPXRXXXXGGPPPPPXGG 397
PP GG PPP GGPPPPP G
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXGG 397
PP GG PPP PPPPP G
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/85 (25%), Positives = 23/85 (27%), Gaps = 1/85 (1%)
Frame = +3
Query: 396 PPLXGGGGAPXXKXXXXXG-XPPPXXXGXKKFFFXXXXXPPFFXXPPXXXXXXXTPPXXX 572
PP+ GG P G PPP G PP PP PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 573 XXXXXXXXXXXXXFXXKKXPPPPXG 647
F PPPP G
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXX---GGPPPPP 406
PP GG PPP GGPPPPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPP 762
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.3 bits (85), Expect = 0.008
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXGG 397
PP GG PPP GGPPPPP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPG 733
Score = 35.9 bits (79), Expect = 0.041
Identities = 26/85 (30%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Frame = +1
Query: 397 PPXGGGGGPPXXXXPXXXG-XPPPXXGGXKNFFXGKXXXPXFFXXPPXXXKXXXPPPGXF 573
PP GG PP P G PPP GG G P PP PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 574 FFFSXXXGGGGGXFXXKXTPPPXGG 648
G F PPP G
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXX---GGPPPPPXGG 397
PP GG PPP GGPPPPP G
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = -2
Query: 477 PPXXGG---GXPPPXRXXXXGGPPPPPXGG 397
PP GG PPP GGPPPPP G
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXGG 397
PP GG PPP PPPPP G
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/85 (25%), Positives = 23/85 (27%), Gaps = 1/85 (1%)
Frame = +3
Query: 396 PPLXGGGGAPXXKXXXXXG-XPPPXXXGXKKFFFXXXXXPPFFXXPPXXXXXXXTPPXXX 572
PP+ GG P G PPP G PP PP PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 573 XXXXXXXXXXXXXFXXKKXPPPPXG 647
F PPPP G
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXX---GGPPPPP 406
PP GG PPP GGPPPPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPP 762
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.3 bits (85), Expect = 0.008
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXGG 397
PP GG PPP GGPPPPP G
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPG 316
Score = 35.9 bits (79), Expect = 0.041
Identities = 26/85 (30%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Frame = +1
Query: 397 PPXGGGGGPPXXXXPXXXG-XPPPXXGGXKNFFXGKXXXPXFFXXPPXXXKXXXPPPGXF 573
PP GG PP P G PPP GG G P PP PPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 574 FFFSXXXGGGGGXFXXKXTPPPXGG 648
G F PPP G
Sbjct: 350 GCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXX---GGPPPPPXGG 397
PP GG PPP GGPPPPP G
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPG 332
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = -2
Query: 477 PPXXGG---GXPPPXRXXXXGGPPPPPXGG 397
PP GG PPP GGPPPPP G
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXGG 397
PP GG PPP PPPPP G
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPG 361
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/85 (25%), Positives = 23/85 (27%), Gaps = 1/85 (1%)
Frame = +3
Query: 396 PPLXGGGGAPXXKXXXXXG-XPPPXXXGXKKFFFXXXXXPPFFXXPPXXXXXXXTPPXXX 572
PP+ GG P G PPP G PP PP PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 573 XXXXXXXXXXXXXFXXKKXPPPPXG 647
F PPPP G
Sbjct: 350 GCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXX---GGPPPPP 406
PP GG PPP GGPPPPP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPP 345
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 34.7 bits (76), Expect = 0.094
Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 483 FXPPXXG-GGXPPPXRXXXXGGPPPPPXGG 397
F PP G GG PPP G PPPPP G
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMG 102
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXG 400
PP GG PPP PPPPP G
Sbjct: 97 PPPMMGGIPPPPPMFGAPPPPPPPSG 122
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXGG 397
PP GG PPP G PPPPP G
Sbjct: 87 PPMFAGGIPPPP-PMMGGIPPPPPMFG 112
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPP 406
PP GG PPP R G PPPPP
Sbjct: 281 PPPPAGGSPPPPR---AGSPPPPP 301
Score = 32.7 bits (71), Expect = 0.38
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXX-----GGPPPPPXGG 397
PP G PPP R G PPPPP GG
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +1
Query: 397 PPXGGGGGPPXXXXPXXXGXPPPXXGGXKNFFXGKXXXPXFFXXPPXXXKXXXPPP 564
PP G G PP P PPP G G P PP PPP
Sbjct: 247 PPLAGSGSPPPP--PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPP 406
PP GG PPP G PPPPP
Sbjct: 313 PPPQAGGSPPP---AGTGSPPPPP 333
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXG 400
PP G G PPP G PPPP G
Sbjct: 247 PPLAGSGSPPP--PPAAGSPPPPRTG 270
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 397 PPXGGGGGPPXXXXPXXXGXPPPXXGGXKNFFXGKXXXPXFFXXPPXXXKXXXPPP 564
PP GG PP P G PPP + G P PP PPP
Sbjct: 281 PPPPAGGSPP----PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXGG 397
PP G PPP GG PPPP G
Sbjct: 273 PPPPTGSPPPPPA----GGSPPPPRAG 295
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPP 406
PP GG PPP R G PPPPP
Sbjct: 302 PPPPAGGSPPPPR---AGSPPPPP 322
Score = 32.7 bits (71), Expect = 0.38
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXX-----GGPPPPPXGG 397
PP G PPP R G PPPPP GG
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +1
Query: 397 PPXGGGGGPPXXXXPXXXGXPPPXXGGXKNFFXGKXXXPXFFXXPPXXXKXXXPPP 564
PP G G PP P PPP G G P PP PPP
Sbjct: 268 PPLAGSGSPPPP--PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPP 406
PP GG PPP G PPPPP
Sbjct: 334 PPPQAGGSPPP---AGTGSPPPPP 354
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXG 400
PP G G PPP G PPPP G
Sbjct: 268 PPLAGSGSPPP--PPAAGSPPPPRTG 291
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 397 PPXGGGGGPPXXXXPXXXGXPPPXXGGXKNFFXGKXXXPXFFXXPPXXXKXXXPPP 564
PP GG PP P G PPP + G P PP PPP
Sbjct: 302 PPPPAGGSPP----PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXGG 397
PP G PPP GG PPPP G
Sbjct: 294 PPPPTGSPPPPPA----GGSPPPPRAG 316
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPP 406
PP GG PPP R G PPPPP
Sbjct: 287 PPPPAGGSPPPPR---AGSPPPPP 307
Score = 32.7 bits (71), Expect = 0.38
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXX-----GGPPPPPXGG 397
PP G PPP R G PPPPP GG
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +1
Query: 397 PPXGGGGGPPXXXXPXXXGXPPPXXGGXKNFFXGKXXXPXFFXXPPXXXKXXXPPP 564
PP G G PP P PPP G G P PP PPP
Sbjct: 253 PPLAGSGSPPPP--PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPP 406
PP GG PPP G PPPPP
Sbjct: 319 PPPQAGGSPPP---AGTGSPPPPP 339
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXG 400
PP G G PPP G PPPP G
Sbjct: 253 PPLAGSGSPPP--PPAAGSPPPPRTG 276
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 397 PPXGGGGGPPXXXXPXXXGXPPPXXGGXKNFFXGKXXXPXFFXXPPXXXKXXXPPP 564
PP GG PP P G PPP + G P PP PPP
Sbjct: 287 PPPPAGGSPP----PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXGG 397
PP G PPP GG PPPP G
Sbjct: 279 PPPPTGSPPPPPA----GGSPPPPRAG 301
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 483 FXPPXXGGGXPPPXR-XXXXGGPPPP 409
+ PP G G PPP + GGPPPP
Sbjct: 671 YGPPGGGQGPPPPPQGQQYYGGPPPP 696
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = +1
Query: 397 PPXGGGGGPPXXXXPXXXGXPPPXXGGXKNFFXGKXXXPXFFXXPPXXXK-XXXPPPGXF 573
PP G P P G PPP G + P F PP PPP F
Sbjct: 392 PPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGF 451
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Frame = +1
Query: 400 PXGGGG-GPPXXXXPXXXGXPPPXXGGXKNFFXGKXXXPXFFXXPP-XXXKXXXPPPG 567
P G GG GPP P G P GG F P + PP PPPG
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPG 460
Score = 29.9 bits (64), Expect = 2.7
Identities = 29/112 (25%), Positives = 33/112 (29%), Gaps = 6/112 (5%)
Frame = +1
Query: 343 GXKKKNFXXXXXXXXXXXPPXGGGGGPPXXXX-----PXXXGXPPPXXGGXKNFF-XGKX 504
G ++ F PP G G PP G PPP NF +
Sbjct: 325 GAPQQGFGAPPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQS 384
Query: 505 XXPXFFXXPPXXXKXXXPPPGXFFFFSXXXGGGGGXFXXKXTPPPXGGGGXF 660
P F PP P G + GG G PP GG G F
Sbjct: 385 GPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGA---PGSYGPPQGGPGGF 433
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 483 FXPPXXGGGXPPPXR-XXXXGGPPPP 409
+ PP G G PPP + GGPPPP
Sbjct: 671 YGPPGGGQGPPPPPQGQQYYGGPPPP 696
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 483 FXPPXXGG-GXPPPXRXXXXGGPPPPP 406
F PP GG PPP GG PPPP
Sbjct: 325 FGPPGMGGMPPPPPPGMRYPGGMPPPP 351
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 483 FXPPXXGG-GXPPPXRXXXXGGPPPPP 406
F PP GG PPP GG PPPP
Sbjct: 335 FGPPGMGGMPPPPPPGMRYPGGMPPPP 361
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 397 PPXGGGGGPPXXXXPXXXGXPPPXXGG 477
PP GGGPP P G PP GG
Sbjct: 1482 PPPMRGGGPPMRGGPPMRGGPPMFRGG 1508
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 5/28 (17%)
Frame = -2
Query: 477 PPXXGG-----GXPPPXRXXXXGGPPPP 409
PP GG G PPP GGPPPP
Sbjct: 1586 PPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 465 GGGXPPPXRXXXXGGPPPPP 406
G PPP GGPPPPP
Sbjct: 574 GAPPPPPPPPPMLGGPPPPP 593
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 25.4 bits (53), Expect(2) = 4.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 556 PPPGXFFFFSXXXGGGGG 609
PPPG + GGGGG
Sbjct: 43 PPPGTSVYMGAGGGGGGG 60
Score = 22.2 bits (45), Expect(2) = 4.3
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 598 GGGGXFXXKXTPPPXGGGG 654
GG PPP GGGG
Sbjct: 75 GGAPAAVSIGAPPPAGGGG 93
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXG 400
PP GG PPP PPPPP G
Sbjct: 782 PPRLQGGIPPPPPLGII--PPPPPPG 805
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 574 FFFSXXXGGGGGXFXXKXTPPPXGGGGXFXGA 669
F F+ GGGGG PPP GGG GA
Sbjct: 16 FLFNLLGGGGGG--CCAPPPPPPCGGGCGGGA 45
Score = 28.7 bits (61), Expect = 6.2
Identities = 26/88 (29%), Positives = 29/88 (32%)
Frame = +1
Query: 406 GGGGGPPXXXXPXXXGXPPPXXGGXKNFFXGKXXXPXFFXXPPXXXKXXXPPPGXFFFFS 585
GGGGG P PPP GG G + P PG +
Sbjct: 22 GGGGGGCCAPPP-----PPPCGGGCGG---GAPAAGGYAVAPQAPIGGGYAQPGGGY--- 70
Query: 586 XXXGGGGGXFXXKXTPPPXGGGGXFXGA 669
GG GG P GGGG + GA
Sbjct: 71 ---GGAGGFGGAYQAAPAIGGGGSYAGA 95
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXG 400
PP GG PPP PPPPP G
Sbjct: 782 PPRLQGGIPPPPPLGII--PPPPPPG 805
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 6.2
Identities = 29/100 (29%), Positives = 30/100 (30%), Gaps = 12/100 (12%)
Frame = +1
Query: 397 PPXGGGGGPPXXXXPXXXGXPP--------PXXGGXKNFFXGKXXXPXFFXXPPXXXKXX 552
PP GG GP G PP P GG F P P
Sbjct: 296 PPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 355
Query: 553 XP---PPGXFF-FFSXXXGGGGGXFXXKXTPPPXGGGGXF 660
P PPG F + GG G F PP G G F
Sbjct: 356 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPF 395
Score = 28.7 bits (61), Expect = 6.2
Identities = 29/100 (29%), Positives = 30/100 (30%), Gaps = 12/100 (12%)
Frame = +1
Query: 397 PPXGGGGGPPXXXXPXXXGXPP--------PXXGGXKNFFXGKXXXPXFFXXPPXXXKXX 552
PP GG GP G PP P GG F P P
Sbjct: 386 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 445
Query: 553 XP---PPGXFF-FFSXXXGGGGGXFXXKXTPPPXGGGGXF 660
P PPG F + GG G F PP G G F
Sbjct: 446 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPF 485
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 477 PPXXGGGXPPPXRXXXXGGPPPPPXG 400
PP G G PPP PPPP G
Sbjct: 88 PPPHGLGPPPPPPHYYTQPPPPPQSG 113
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 453 PPPXRXXXXGGPPPPP 406
PPP GGPPPPP
Sbjct: 540 PPPPVGMANGGPPPPP 555
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 474 PXXGGGXPPPXRXXXXGGPPPPPXGG 397
P GGG P P GPPPPP G
Sbjct: 112 PGYGGG-PGPHHHHHHHGPPPPPYYG 136
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 474 PXXGGGXPPPXRXXXXGGPPPPPXGG 397
P GGG P P GPPPPP G
Sbjct: 112 PGYGGG-PGPHHHHHHHGPPPPPYYG 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,744,260
Number of Sequences: 27780
Number of extensions: 219152
Number of successful extensions: 1245
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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