Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_L08
         (863 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040659-3|AAK39392.1|  919|Caenorhabditis elegans Hypothetical ...    29   5.7  
AF040659-2|AAK39393.1|  873|Caenorhabditis elegans Hypothetical ...    29   5.7  

>AF040659-3|AAK39392.1|  919|Caenorhabditis elegans Hypothetical
           protein ZK484.4a protein.
          Length = 919

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -2

Query: 253 SSANVAAHLRXLLEEXPPGXRSSADRAESQHQREDEAQKTDE 128
           SSAN   ++  LL+E P    SS+   ES     D    TDE
Sbjct: 62  SSANDRRNMDDLLDEAPSSSSSSSHVGESSSSNLDRGTMTDE 103


>AF040659-2|AAK39393.1|  873|Caenorhabditis elegans Hypothetical
           protein ZK484.4b protein.
          Length = 873

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -2

Query: 253 SSANVAAHLRXLLEEXPPGXRSSADRAESQHQREDEAQKTDE 128
           SSAN   ++  LL+E P    SS+   ES     D    TDE
Sbjct: 62  SSANDRRNMDDLLDEAPSSSSSSSHVGESSSSNLDRGTMTDE 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,202,678
Number of Sequences: 27780
Number of extensions: 173030
Number of successful extensions: 353
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 353
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)