Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_L07
         (897 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   7.5  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   7.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   7.5  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   9.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.9  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   9.9  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 429 VHSCSPSLGVRRSWCCRLQVLKL 361
           VH+   ++  R  WC  L+ LKL
Sbjct: 73  VHTILTTITKRNQWCKLLENLKL 95


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 429 VHSCSPSLGVRRSWCCRLQVLKL 361
           VH+   ++  R  WC  L+ LKL
Sbjct: 73  VHTILTTITKRNQWCKLLENLKL 95


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 429 VHSCSPSLGVRRSWCCRLQVLKL 361
           VH+   ++  R  WC  L+ LKL
Sbjct: 393 VHTILTTITKRNQWCKLLENLKL 415


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +3

Query: 345 QAYGT--RVLGPGGDSTNYGGRLDW 413
           + +GT  RV  P    T YGGRL W
Sbjct: 75  KVHGTTVRVRPPKVYPTPYGGRLVW 99


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +3

Query: 345 QAYGT--RVLGPGGDSTNYGGRLDW 413
           + +GT  RV  P    T YGGRL W
Sbjct: 389 KVHGTTVRVRPPKVYPTPYGGRLVW 413


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +3

Query: 345 QAYGT--RVLGPGGDSTNYGGRLDW 413
           + +GT  RV  P    T YGGRL W
Sbjct: 622 KVHGTTVRVRPPKVYPTPYGGRLVW 646


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +3

Query: 345 QAYGT--RVLGPGGDSTNYGGRLDW 413
           + +GT  RV  P    T YGGRL W
Sbjct: 622 KVHGTTVRVRPPKVYPTPYGGRLVW 646


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 303 NSXXFNDXRGKLTGQAYGT 359
           +S  FN+ R K+  Q +GT
Sbjct: 96  SSEAFNEFRTKILAQVHGT 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,891
Number of Sequences: 336
Number of extensions: 3463
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)