Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_L07
(897 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034697-1|AAH34697.1| 584|Homo sapiens keratin 10 (epidermolyt... 32 3.2
BC051694-1|AAH51694.1| 677|Homo sapiens similar to KIAA1680 pro... 31 4.3
AB051467-1|BAB21771.1| 902|Homo sapiens KIAA1680 protein protein. 31 4.3
M94077-1|AAA36181.1| 316|Homo sapiens loricrin protein. 31 5.7
M61120-1|AAA36180.1| 316|Homo sapiens loricrin protein. 31 5.7
AB013076-1|BAA25794.1| 338|Homo sapiens loricrin protein. 31 5.7
CR536555-1|CAG38792.1| 316|Homo sapiens LOR protein. 31 7.5
AL161636-5|CAI19560.1| 312|Homo sapiens loricrin protein. 31 7.5
>BC034697-1|AAH34697.1| 584|Homo sapiens keratin 10 (epidermolytic
hyperkeratosis; keratosis palmaris et plantaris)
protein.
Length = 584
Score = 31.9 bits (69), Expect = 3.2
Identities = 30/119 (25%), Positives = 38/119 (31%), Gaps = 1/119 (0%)
Frame = +3
Query: 237 GGGKVFGTLGQNXXGLFGKAGYNSXXFNDXRGKLTGQAYGTRVLGPGGDSTNYGGRLDWA 416
GGG+ G+ G G G + + G +G YG G G YGG
Sbjct: 461 GGGRGGGSFGGGYGGGSSGGGSSGGGYGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSG 520
Query: 417 NKNAQATIDLNRQIGGRSGMTASGSGVWDLDKNTHFSAG-GMVSKEFGHKRPDVGLQAE 590
++ GG SG G G + G G S GHK G E
Sbjct: 521 GHGGSSSGGYG---GGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGE 576
>BC051694-1|AAH51694.1| 677|Homo sapiens similar to KIAA1680
protein protein.
Length = 677
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 606 TNHGGSLLGVRRLVFCDRTPSRPYHRQKSGCSYPDPTHRSLMLSS 472
TN G RR +F RTPS +H +K +PT+++L +S+
Sbjct: 49 TNSSSGSTGKRRSIF--RTPSISFHHKKGSEPKQEPTNQNLSISN 91
>AB051467-1|BAB21771.1| 902|Homo sapiens KIAA1680 protein protein.
Length = 902
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 606 TNHGGSLLGVRRLVFCDRTPSRPYHRQKSGCSYPDPTHRSLMLSS 472
TN G RR +F RTPS +H +K +PT+++L +S+
Sbjct: 51 TNSSSGSTGKRRSIF--RTPSISFHHKKGSEPKQEPTNQNLSISN 93
>M94077-1|AAA36181.1| 316|Homo sapiens loricrin protein.
Length = 316
Score = 31.1 bits (67), Expect = 5.7
Identities = 28/105 (26%), Positives = 36/105 (34%), Gaps = 3/105 (2%)
Frame = +3
Query: 189 QPSRRHPRAVTWAKQMGGGKVFGTLGQNXXGLFGKAGYNSXXFNDXRGKLTGQAYGTRVL 368
QP+ + P V K GGG G G G FG G G G Y
Sbjct: 7 QPTPQPP--VDCVKTSGGGGGGGGTGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGC 64
Query: 369 GPGGDSTNYGGRLDWANKNAQATIDLN---RQIGGRSGMTASGSG 494
G G GG + + ++ + GG SG +SG G
Sbjct: 65 GGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGG 109
>M61120-1|AAA36180.1| 316|Homo sapiens loricrin protein.
Length = 316
Score = 31.1 bits (67), Expect = 5.7
Identities = 28/105 (26%), Positives = 36/105 (34%), Gaps = 3/105 (2%)
Frame = +3
Query: 189 QPSRRHPRAVTWAKQMGGGKVFGTLGQNXXGLFGKAGYNSXXFNDXRGKLTGQAYGTRVL 368
QP+ + P V K GGG G G G FG G G G Y
Sbjct: 7 QPTPQPP--VDCVKTSGGGGGGGGTGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGC 64
Query: 369 GPGGDSTNYGGRLDWANKNAQATIDLN---RQIGGRSGMTASGSG 494
G G GG + + ++ + GG SG +SG G
Sbjct: 65 GGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGG 109
>AB013076-1|BAA25794.1| 338|Homo sapiens loricrin protein.
Length = 338
Score = 31.1 bits (67), Expect = 5.7
Identities = 28/105 (26%), Positives = 36/105 (34%), Gaps = 3/105 (2%)
Frame = +3
Query: 189 QPSRRHPRAVTWAKQMGGGKVFGTLGQNXXGLFGKAGYNSXXFNDXRGKLTGQAYGTRVL 368
QP+ + P V K GGG G G G FG G G G Y
Sbjct: 7 QPTPQPP--VDCVKTSGGGGGGGGTGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGC 64
Query: 369 GPGGDSTNYGGRLDWANKNAQATIDLN---RQIGGRSGMTASGSG 494
G G GG + + ++ + GG SG +SG G
Sbjct: 65 GGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGG 109
>CR536555-1|CAG38792.1| 316|Homo sapiens LOR protein.
Length = 316
Score = 30.7 bits (66), Expect = 7.5
Identities = 28/105 (26%), Positives = 36/105 (34%), Gaps = 3/105 (2%)
Frame = +3
Query: 189 QPSRRHPRAVTWAKQMGGGKVFGTLGQNXXGLFGKAGYNSXXFNDXRGKLTGQAYGTRVL 368
QP+ + P V K GGG G G G FG G G G Y
Sbjct: 7 QPTPQPP--VDCVKTSGGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGC 64
Query: 369 GPGGDSTNYGGRLDWANKNAQATIDLN---RQIGGRSGMTASGSG 494
G G GG + + ++ + GG SG +SG G
Sbjct: 65 GGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGG 109
>AL161636-5|CAI19560.1| 312|Homo sapiens loricrin protein.
Length = 312
Score = 30.7 bits (66), Expect = 7.5
Identities = 28/105 (26%), Positives = 36/105 (34%), Gaps = 3/105 (2%)
Frame = +3
Query: 189 QPSRRHPRAVTWAKQMGGGKVFGTLGQNXXGLFGKAGYNSXXFNDXRGKLTGQAYGTRVL 368
QP+ + P V K GGG G G G FG G G G Y
Sbjct: 7 QPTPQPP--VDCVKTSGGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGC 64
Query: 369 GPGGDSTNYGGRLDWANKNAQATIDLN---RQIGGRSGMTASGSG 494
G G GG + + ++ + GG SG +SG G
Sbjct: 65 GGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGG 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,068,807
Number of Sequences: 237096
Number of extensions: 2126987
Number of successful extensions: 4326
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4315
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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