Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_L06
(1050 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018) 66 6e-11
SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0) 62 7e-10
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 37 0.031
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.054
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.072
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 35 0.13
SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) 34 0.22
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) 33 0.38
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 33 0.51
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 32 0.67
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.6
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.6
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.6
SB_53628| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19) 29 4.7
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 29 4.7
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.3
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 8.3
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 29 8.3
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 29 8.3
SB_11360| Best HMM Match : PDZ (HMM E-Value=0) 29 8.3
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 8.3
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.3
>SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018)
Length = 106
Score = 65.7 bits (153), Expect = 6e-11
Identities = 33/50 (66%), Positives = 35/50 (70%)
Frame = +2
Query: 122 MGKEXTHINHCPSSRHVDSGKSTTTGHLIYKCGGIDXRTIXXFXXEAHEM 271
M KE HIN HVDSGKSTTTGHLIYKCGGID RTI F E+ E+
Sbjct: 1 MPKEKIHINIVVIG-HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKESSEV 49
>SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0)
Length = 322
Score = 62.1 bits (144), Expect = 7e-10
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 269 MGXGSFKYAWVLDXLXADRXRGIXIDIALWKFQT 370
MG GSFKYAWVLD L A+R RGI IDIALWKF+T
Sbjct: 1 MGKGSFKYAWVLDKLKAERERGITIDIALWKFET 34
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 36.7 bits (81), Expect = 0.031
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +1
Query: 598 PPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPXX 777
PP P P + P P P S PPP P P P PP PP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Query: 778 GXPQXP 795
P P
Sbjct: 425 PPPPPP 430
Score = 34.7 bits (76), Expect = 0.13
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P PP P P P +P P PPP P P P PP PP
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Query: 772 XXGXP 786
P
Sbjct: 428 PPPPP 432
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 35.9 bits (79), Expect = 0.054
Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 2/72 (2%)
Frame = +1
Query: 586 LRPGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXT--TPAXXTYPXPP 759
+ P P+T H P T P S T L H P P T TP+ + P P
Sbjct: 417 ITPRTPSTPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSTPSTP 476
Query: 760 IXPPXXGXPQXP 795
P P P
Sbjct: 477 STPSTPSTPSTP 488
Score = 33.5 bits (73), Expect = 0.29
Identities = 20/70 (28%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXT--TPAXXTYPXPPIX 765
P P+T P T P S T L H P P T TP+ + P P
Sbjct: 643 PSTPSTRSTPSTPSTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSMPNTPST 702
Query: 766 PPXXGXPQXP 795
P P P
Sbjct: 703 PSTPSTPSTP 712
Score = 29.5 bits (63), Expect = 4.7
Identities = 19/70 (27%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXT--TPAXXTYPXPPIX 765
P P+T P T APG T P P T TP+ + P P
Sbjct: 488 PSTPSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAPGTPSTPSTPSTPSTPSTPSTPST 547
Query: 766 PPXXGXPQXP 795
P P P
Sbjct: 548 PSMPSTPSTP 557
Score = 28.7 bits (61), Expect = 8.3
Identities = 19/70 (27%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXT--TPAXXTYPXPPIX 765
P P+T P T P S T P P T TP+ + P P
Sbjct: 102 PSTPSTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPST 161
Query: 766 PPXXGXPQXP 795
P G P P
Sbjct: 162 PITPGTPSTP 171
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 35.5 bits (78), Expect = 0.072
Identities = 22/68 (32%), Positives = 24/68 (35%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P PPT P P T+ P P + PPP P P P PP PP
Sbjct: 347 PPPPTNNPPSPPPPTNNTPPPPPPTNKPPPP-----PPPTNGPPPPPPPTNGPPPP-PPP 400
Query: 772 XXGXPQXP 795
G P P
Sbjct: 401 TNGPPPPP 408
Score = 33.5 bits (73), Expect = 0.29
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P PPT P P T+ P P + PPP P P P PP PP
Sbjct: 357 PPPPTNNTPPPPPPTNKPPPPPPPTNGPPPP-----PPPTNGPPPPPPPTNGPPPP-PPP 410
Query: 772 XXGXP 786
G P
Sbjct: 411 TNGPP 415
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 34.7 bits (76), Expect = 0.13
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P P + P ++P AP S T PP P T P P PP PP
Sbjct: 309 PSEPESSNKSSEPDSTPATNAPPSDSPSTTTPTTPQPPTPTTPKTHPQLGPPPPPPPPPP 368
>SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43)
Length = 547
Score = 33.9 bits (74), Expect = 0.22
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 209 YKCGGIDXRTIXXFXXEAHEMGXGSFKYAWVLDXLXADRXRGIXIDIALWKFQT 370
Y G +D RT+ + EA E ++ +W LD +R +G +++ F T
Sbjct: 166 YLTGQVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGNTVEVGRAAFDT 219
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 33.5 bits (73), Expect = 0.29
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXP- 768
P PP +P P P P P + PPP P P YP PP P
Sbjct: 147 PYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPP---YPPPPNPPYPPPPNPPYPPPPNAPN 203
Query: 769 PXXGXPQXP 795
P P P
Sbjct: 204 PPPPNPPYP 212
Score = 32.7 bits (71), Expect = 0.51
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = +3
Query: 639 PXXPRPRPAIXRXHGXPPPPXTTXXXSXHNACAXHLPXPPHXPTXXGPXPXAXGAPLHP 815
P P P P PPPP NA P PP+ P P P + AP P
Sbjct: 93 PYPPPPYPPYPPPPPYPPPPNPPYPPPP-NAPYPPPPNPPYPPPPNAPYPPSPNAPYPP 150
Score = 32.7 bits (71), Expect = 0.51
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPP--IX 765
P PP +P P P P P PPP P P YP PP
Sbjct: 165 PNPPPPNAPYPPPPYPPPPNPPYPPPPNPP-----YPPPPNAPNPPPPNPPYPPPPNAPN 219
Query: 766 PPXXGXPQXP 795
PP P P
Sbjct: 220 PPYPPPPNAP 229
Score = 31.9 bits (69), Expect = 0.89
Identities = 22/69 (31%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTP-AXXTYPXPPIXP 768
P PP + SP A P P + L + PPP P P YP PP P
Sbjct: 128 PNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPL-YPPPPNPPPPNAPYPPPPYPPPP-NP 185
Query: 769 PXXGXPQXP 795
P P P
Sbjct: 186 PYPPPPNPP 194
Score = 31.9 bits (69), Expect = 0.89
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 3/63 (4%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXP---PI 762
P PP +P P P AP P PPP P P P P P
Sbjct: 152 PNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPY 211
Query: 763 XPP 771
PP
Sbjct: 212 PPP 214
Score = 31.5 bits (68), Expect = 1.2
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +1
Query: 598 PPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPP--IXPP 771
PPT +P P P P + PPP P P YP PP PP
Sbjct: 84 PPTNFSPNPPYPPPPYPPYPPPPPYPPPPNPPY-PPPPNAPYPPPPNPPYPPPPNAPYPP 142
Query: 772 XXGXPQXP 795
P P
Sbjct: 143 SPNAPYPP 150
Score = 30.3 bits (65), Expect = 2.7
Identities = 20/69 (28%), Positives = 21/69 (30%), Gaps = 1/69 (1%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXP- 768
P PP +P P P P P PPP P P YP P P
Sbjct: 90 PNPPYPPPPYP-PYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPY 148
Query: 769 PXXGXPQXP 795
P P P
Sbjct: 149 PPPPNPPYP 157
Score = 30.3 bits (65), Expect = 2.7
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P PP +P P +P P P PP P P YP P PP
Sbjct: 107 PYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNA--PYPPSPNAPYPPPPNPPYPPPLYPPP 164
Query: 772 XXGXP 786
P
Sbjct: 165 PNPPP 169
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Frame = +3
Query: 639 PXXPRPRPAIXRXHGXP-PPPXTTXXXSXHNACAXHLPXPPHXPTXXGPXPXAXGAPLHP 815
P P P P P PPP NA P PP+ P P P P P
Sbjct: 170 PNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAP 229
Query: 816 THP 824
P
Sbjct: 230 NPP 232
Score = 29.1 bits (62), Expect = 6.2
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P P P P P AP P S PPP P P YP PP PP
Sbjct: 118 PPPNAPYPPPPNPPYPPPPNAPYPPSPNAP-----YPPPPNPPYPPP---LYPPPP-NPP 168
Query: 772 XXGXPQXP 795
P P
Sbjct: 169 PPNAPYPP 176
>SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)
Length = 293
Score = 33.1 bits (72), Expect = 0.38
Identities = 23/67 (34%), Positives = 25/67 (37%)
Frame = +1
Query: 595 GPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPX 774
GPP P P P A GP TA + PPP P T+ YP P P
Sbjct: 117 GPPPPYS--PIPPQVPYPGAAGPPMPHPTASVY--PPPGGYPPTSYPPQPYPAQPY--PQ 170
Query: 775 XGXPQXP 795
G P P
Sbjct: 171 QGYPPQP 177
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 32.7 bits (71), Expect = 0.51
Identities = 22/72 (30%), Positives = 23/72 (31%)
Frame = +1
Query: 580 GXLRPGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPP 759
G P PP M P P P + P A PPP P P PP
Sbjct: 312 GSAPPPPPARMGTAPPP-PPPSRSSQRPPPPSRGAP----PPPSMGMAPPPVGGAAPPPP 366
Query: 760 IXPPXXGXPQXP 795
PP G P P
Sbjct: 367 PPPPVGGPPPPP 378
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 32.3 bits (70), Expect = 0.67
Identities = 21/59 (35%), Positives = 22/59 (37%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXP 768
P P+ P P TSP AP P A PPP P T P PPI P
Sbjct: 117 PETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPAT---GGPPPPPPIAP 172
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXP-XTTPAXXTYPXPPIXP 768
P P T P P +P P P A PPP P T PA P
Sbjct: 130 PTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPP 189
Query: 769 PXXGXPQXP 795
P G P P
Sbjct: 190 PPSGGPPPP 198
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/65 (32%), Positives = 24/65 (36%)
Frame = +1
Query: 601 PTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPXXG 780
PT M T P P P++ E + PPP P T P PPI P G
Sbjct: 98 PTPMVAQSVAPTPP----PPPRAPETPSQAPSPPPPPTSPATRAPP---PPPPIAPATGG 150
Query: 781 XPQXP 795
P P
Sbjct: 151 PPPPP 155
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +3
Query: 648 PRPRPAIXRXHGXPPPPXTTXXXSXHNACAXHLPXPPHXPTXXGPXPXAXGAPLHPTHP 824
P P P I G PPPP + A A L P GP P P P P
Sbjct: 151 PPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPPPPPP 209
Score = 29.9 bits (64), Expect = 3.6
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P P T P P AP P + PPP P T + P PP P
Sbjct: 76 PTPQTQASTAP-PLVPAGVEAPTPTPMVAQSVAPTPPPPPRAPETPSQAPSPPPPPTSPA 134
Query: 772 XXGXPQXP 795
P P
Sbjct: 135 TRAPPPPP 142
Score = 29.1 bits (62), Expect = 6.2
Identities = 20/65 (30%), Positives = 22/65 (33%)
Frame = +1
Query: 601 PTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPXXG 780
PT P T A +P P T+ PPP P P PPI P G
Sbjct: 108 PTPPPPPRAPETPSQAPSPPPPP---TSPATRAPPPPP-PIAPATGGPPPPPPIAPATGG 163
Query: 781 XPQXP 795
P P
Sbjct: 164 PPPPP 168
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/60 (35%), Positives = 23/60 (38%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P PP P P + A AP P + A PPP P PA P PP PP
Sbjct: 55 PSPPAAAPAAPPPPAAAPA-APPPPAAPPAAPPP--PPPLPAPPPPPAQPA-PQPPPAPP 110
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +1
Query: 622 PXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTT-PAXXTYPXPPIXPPXXGXPQXP 795
P P SP A AP A PPP P P P PP PP PQ P
Sbjct: 51 PPPPPSPPAAAPAAPPPPAAAPAA--PPPPAAPPAAPPPPPPLPAPP-PPPAQPAPQPP 106
Score = 29.9 bits (64), Expect = 3.6
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +3
Query: 639 PXXPRPRPAIXRXHGXPPPPXTTXXXSXHNACAXHLPXPPHXPTXXGPXPXAXGAPLHPT 818
P P P P PPPP A P PP P P P A AP P
Sbjct: 50 PPPPPPSPPAAAP-AAPPPPAAAPAAPPPPAAPPAAPPPP-PPLPAPPPPPAQPAPQPPP 107
Query: 819 HP 824
P
Sbjct: 108 AP 109
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 31.5 bits (68), Expect = 1.2
Identities = 20/68 (29%), Positives = 24/68 (35%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P P P PR P AP P+ A +PPP P P P + PP
Sbjct: 457 PHPRVPPPGAPHPRVPPPG-APHPRVPPPGAPHPRVPPPGAPHQRVPPPGA-PHPRVPPP 514
Query: 772 XXGXPQXP 795
P+ P
Sbjct: 515 GAPHPRVP 522
Score = 31.5 bits (68), Expect = 1.2
Identities = 20/68 (29%), Positives = 24/68 (35%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P P P PR P AP P+ A +PPP P P P + PP
Sbjct: 467 PHPRVPPPGAPHPRVPPPG-APHPRVPPPGAPHQRVPPPGAPHPRVPPPGA-PHPRVPPP 524
Query: 772 XXGXPQXP 795
P+ P
Sbjct: 525 GAPHPRVP 532
Score = 31.5 bits (68), Expect = 1.2
Identities = 20/68 (29%), Positives = 24/68 (35%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P P P PR P AP P+ A +PPP P P P + PP
Sbjct: 527 PHPRVPPPGAPHPRVPPPG-APHPRVPPPGASHPRVPPPGAPHPRVPPPGA-PHPRVPPP 584
Query: 772 XXGXPQXP 795
P+ P
Sbjct: 585 GTPHPRVP 592
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +1
Query: 622 PXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPXXGXPQXP 795
P PR P AP P+ A +PPP P P P + PP P+ P
Sbjct: 507 PHPRVPPPG-APHPRVPPPGAPHPRVPPPGAPHPRVPPPGA-PHPRVPPPGASHPRVP 562
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/68 (29%), Positives = 24/68 (35%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P P P PR P AP P+ A +PPP P P P + PP
Sbjct: 427 PHPRVPPPGAPHPRFPPPG-APHPRVPPPGAPHPRVPPPGAPHPRVPPPGA-PHPRVPPP 484
Query: 772 XXGXPQXP 795
P+ P
Sbjct: 485 GAPHPRVP 492
Score = 30.3 bits (65), Expect = 2.7
Identities = 20/68 (29%), Positives = 24/68 (35%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P P P PR P A P+ A +PPP P T P P + PP
Sbjct: 537 PHPRVPPPGAPHPRVPPPG-ASHPRVPPPGAPHPRVPPPGAPHPRVPPPGT-PHPRVPPP 594
Query: 772 XXGXPQXP 795
P+ P
Sbjct: 595 GAPHPKVP 602
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 2/72 (2%)
Frame = +1
Query: 586 LRPGPPTTMXX--HPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPP 759
++P P TT P P T+P +P S P P TTP + P
Sbjct: 1264 IKPSPSTTSTTPIKPSPSTNPIKPSPSTTSTTPIKPSPSTTPIKPSPSTTPIKPSPSTTP 1323
Query: 760 IXPPXXGXPQXP 795
I P P P
Sbjct: 1324 IKPSPSTTPIKP 1335
Score = 29.5 bits (63), Expect = 4.7
Identities = 17/67 (25%), Positives = 25/67 (37%)
Frame = +1
Query: 586 LRPGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIX 765
++P P TT P P T+P +P + + + P TTP + PI
Sbjct: 1297 IKPSPSTT-PIKPSPSTTPIKPSPSTTPIKPSPSTTPIKPSPSTTSTTPIKPSPSTTPIK 1355
Query: 766 PPXXGXP 786
P P
Sbjct: 1356 PSPSTTP 1362
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Frame = +1
Query: 586 LRPGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLP-PPXXXPXTTPAXXTYPXPPI 762
L+P PT P + SP + P P + + +P PP P P+ P
Sbjct: 1017 LKPPGPTEQPVPPKRKASPPSAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQP 1076
Query: 763 XPPXXGXPQXP 795
PP P P
Sbjct: 1077 PPPSTSQPVPP 1087
>SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 29.9 bits (64), Expect = 3.6
Identities = 20/63 (31%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Frame = +3
Query: 639 PXXPRPRP-AIXRXHGXPPPPXTTXXXSXHNACAXHLPXPPHXPTXXGPXPXAXGAPLHP 815
P P P P A PPPP T H+ LP PP P P +P
Sbjct: 685 PPPPLPTPIASSEPLPLPPPPPPTGIDIPHSPSKDDLPLPP--PPEEVSLPPPDESPPSS 742
Query: 816 THP 824
HP
Sbjct: 743 KHP 745
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +3
Query: 648 PRPRPAIXRXHGXPPPPXTTXXXSXHNACAXHLPXPPHXPTXXGPXPXAXGAPLHP 815
P P P PPPP S + P PP P P P PL P
Sbjct: 920 PPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPP 975
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/72 (26%), Positives = 23/72 (31%)
Frame = +1
Query: 580 GXLRPGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPP 759
G + P PP P P P AP + PPP P + PP
Sbjct: 917 GSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPG----GNAPPPPPPPGGSAPPPGGGAPP 972
Query: 760 IXPPXXGXPQXP 795
+ PP G P
Sbjct: 973 LPPPPGGSAPPP 984
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.9 bits (64), Expect = 3.6
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P T P P T+P P P + T P P T P T P P P
Sbjct: 49 PTQTTPTPTTPSP-TAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTP 107
Query: 772 XXGXPQXP 795
P P
Sbjct: 108 TAHTPTTP 115
Score = 29.9 bits (64), Expect = 3.6
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P P T+ P P T+P P P TA P P T P T P P P
Sbjct: 84 PTPTTSTLTKPTPATTPTPTKPTP-----TAHTPTTPTPTAHTPTKPTPKT-PTPTTPTP 137
Query: 772 XXGXPQXP 795
P P
Sbjct: 138 TAHTPTTP 145
>SB_53628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 678 HGXPPPPXTTXXXSXHNACAXHLPXPPHXPTXXG 779
HG PPPP T HN H P P T G
Sbjct: 6 HGTPPPPVTLSPLPVHNT---HTPRAPFASTCIG 36
>SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19)
Length = 619
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPP 705
P PPT + HP P P P P + T PP
Sbjct: 65 PVPPTPLVQHPEPEAPPQLPPPPPFIVDDTESPQEQPP 102
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 29.5 bits (63), Expect = 4.7
Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Frame = +3
Query: 639 PXXPRPRPAIXRXHGXPPPPXTTXXXSXHNACAXHLPXPPHXPT----XXGPXPXAXGAP 806
P P PA H P PP + + N P PP P P P AP
Sbjct: 215 PGSPHIPPAPLHPHIPPAPPNPSKAIATPNPPMPETPLPPATPNPFIPPASPNPSIPPAP 274
Query: 807 LHPTHP 824
+P+ P
Sbjct: 275 PNPSIP 280
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPP 705
P PPT + HP P P P P + T PP
Sbjct: 724 PVPPTPLVQHPEPEAPPQLPPPPPFIVDDTESPQEQPP 761
>SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 29.1 bits (62), Expect = 6.2
Identities = 20/69 (28%), Positives = 21/69 (30%), Gaps = 2/69 (2%)
Frame = +1
Query: 595 GPPTTMXXHPXPRTSPXAXAPG--PQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXP 768
G P +P P T P G PQ H PPP P P T P P
Sbjct: 578 GYPAPTPSYPQPGTYPPPHPSGGYPQPSPPHGGHPHHPPPTGYPGGYPGTHTAPPAGGYP 637
Query: 769 PXXGXPQXP 795
P P
Sbjct: 638 TGQHPPPPP 646
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 28.7 bits (61), Expect = 8.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 929 PRTPXXPXPXTPXPPLXPPXXLSSXT 1006
PR P P P P PP PP +S T
Sbjct: 864 PRRPPPPPPPPPPPPPPPPPPPASST 889
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 28.7 bits (61), Expect = 8.3
Identities = 19/63 (30%), Positives = 21/63 (33%)
Frame = +1
Query: 598 PPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPXX 777
PP T P P P P P T+ PPP P + P P PP
Sbjct: 231 PPPTGSSRPLPAPPPGENRPPPPMRGPTSG-GEPPPPKNAPPPPKRGSSNPPP---PPTR 286
Query: 778 GXP 786
G P
Sbjct: 287 GPP 289
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 28.7 bits (61), Expect = 8.3
Identities = 16/58 (27%), Positives = 19/58 (32%)
Frame = +1
Query: 598 PPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
PP M HP P + P + PPP P P P P + PP
Sbjct: 228 PPVGMLGHPPMGAPPPPHSMPPPGMPPPGMM---PPPGFPPMGMPGMGGMPPPGMPPP 282
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 28.7 bits (61), Expect = 8.3
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = +1
Query: 598 PPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPXX 777
P T P +P AP PP P P P PPI PP
Sbjct: 133 PAKTTSATTKPVMTPTTPAPMTLPPISPIDPPRTQPPPIFPIDPPRTQPPPIPPIDPPRT 192
Query: 778 GXPQXP 795
P P
Sbjct: 193 QPPPIP 198
>SB_11360| Best HMM Match : PDZ (HMM E-Value=0)
Length = 625
Score = 28.7 bits (61), Expect = 8.3
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRT-SPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTP 732
P PPT P P T AP P E + H+PP P +P
Sbjct: 114 PSPPTLPKQTPPPPTPEVIETAPSPSPGE-NGEVNHVPPESPVPPASP 160
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 28.7 bits (61), Expect = 8.3
Identities = 19/63 (30%), Positives = 21/63 (33%)
Frame = +1
Query: 598 PPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPXX 777
PP T P P P P P T+ PPP P + P P PP
Sbjct: 143 PPPTGSSRPLPAPPPGENRPPPPMRGPTSG-GEPPPPKNAPPPPKRGSSNPPP---PPTR 198
Query: 778 GXP 786
G P
Sbjct: 199 GPP 201
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 28.7 bits (61), Expect = 8.3
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 5/57 (8%)
Frame = +1
Query: 631 RTSPXAXAPG-----PQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPXXGXP 786
+T P A AP P + L PPP P P P PP PP P
Sbjct: 197 KTKPSAAAPKQQKATPVNPPEPDYLEPTPPPPAAPAPPPPPAAAPPPPPPPPPVKKP 253
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,671,524
Number of Sequences: 59808
Number of extensions: 301415
Number of successful extensions: 1495
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3154066538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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