Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_L06
(1050 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 129 4e-30
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 129 4e-30
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 129 4e-30
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 129 4e-30
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 99 6e-21
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 54 2e-07
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 40 0.004
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 36 0.036
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.34
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.59
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.59
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.59
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 32 0.78
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.0
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 31 1.0
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.4
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 1.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.8
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 4.2
U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical pr... 29 4.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.5
AC006714-1|AAK29717.2| 240|Caenorhabditis elegans Hypothetical ... 29 5.5
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 29 7.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 7.3
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 7.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 7.3
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 7.3
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 29 7.3
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 28 9.7
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 28 9.7
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 28 9.7
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 28 9.7
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 129 bits (311), Expect = 4e-30
Identities = 70/119 (58%), Positives = 75/119 (63%)
Frame = +2
Query: 122 MGKEXTHINHCPSSRHVDSGKSTTTGHLIYKCGGIDXRTIXXFXXEAHEMGXGSFKYAWV 301
MGKE HIN HVDSGKSTTTGHLIYKCGGID RTI F EA EMG GSFKYAWV
Sbjct: 1 MGKEKVHINIVVIG-HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 59
Query: 302 LDXLXADRXRGIXIDIALWKFQTXPVLC*XXXXSXPPXFHQXTXSQEPSQAXCXXLIVA 478
LD L A+R RGI IDIALWKF+T F + + SQA C L+VA
Sbjct: 60 LDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMIT-GTSQADCAVLVVA 117
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 129 bits (311), Expect = 4e-30
Identities = 70/119 (58%), Positives = 75/119 (63%)
Frame = +2
Query: 122 MGKEXTHINHCPSSRHVDSGKSTTTGHLIYKCGGIDXRTIXXFXXEAHEMGXGSFKYAWV 301
MGKE HIN HVDSGKSTTTGHLIYKCGGID RTI F EA EMG GSFKYAWV
Sbjct: 1 MGKEKVHINIVVIG-HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 59
Query: 302 LDXLXADRXRGIXIDIALWKFQTXPVLC*XXXXSXPPXFHQXTXSQEPSQAXCXXLIVA 478
LD L A+R RGI IDIALWKF+T F + + SQA C L+VA
Sbjct: 60 LDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMIT-GTSQADCAVLVVA 117
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 129 bits (311), Expect = 4e-30
Identities = 70/119 (58%), Positives = 75/119 (63%)
Frame = +2
Query: 122 MGKEXTHINHCPSSRHVDSGKSTTTGHLIYKCGGIDXRTIXXFXXEAHEMGXGSFKYAWV 301
MGKE HIN HVDSGKSTTTGHLIYKCGGID RTI F EA EMG GSFKYAWV
Sbjct: 1 MGKEKVHINIVVIG-HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 59
Query: 302 LDXLXADRXRGIXIDIALWKFQTXPVLC*XXXXSXPPXFHQXTXSQEPSQAXCXXLIVA 478
LD L A+R RGI IDIALWKF+T F + + SQA C L+VA
Sbjct: 60 LDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMIT-GTSQADCAVLVVA 117
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 129 bits (311), Expect = 4e-30
Identities = 70/119 (58%), Positives = 75/119 (63%)
Frame = +2
Query: 122 MGKEXTHINHCPSSRHVDSGKSTTTGHLIYKCGGIDXRTIXXFXXEAHEMGXGSFKYAWV 301
MGKE HIN HVDSGKSTTTGHLIYKCGGID RTI F EA EMG GSFKYAWV
Sbjct: 1 MGKEKVHINIVVIG-HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 59
Query: 302 LDXLXADRXRGIXIDIALWKFQTXPVLC*XXXXSXPPXFHQXTXSQEPSQAXCXXLIVA 478
LD L A+R RGI IDIALWKF+T F + + SQA C L+VA
Sbjct: 60 LDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMIT-GTSQADCAVLVVA 117
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 98.7 bits (235), Expect = 6e-21
Identities = 48/64 (75%), Positives = 48/64 (75%)
Frame = +2
Query: 122 MGKEXTHINHCPSSRHVDSGKSTTTGHLIYKCGGIDXRTIXXFXXEAHEMGXGSFKYAWV 301
MGKE HIN HVDSGKSTTTGHLIYKCGGID RTI F EA EMG GSFKYAWV
Sbjct: 1 MGKEKVHINIVVIG-HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 59
Query: 302 LDXL 313
LD L
Sbjct: 60 LDKL 63
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/68 (48%), Positives = 41/68 (60%)
Frame = +2
Query: 167 HVDSGKSTTTGHLIYKCGGIDXRTIXXFXXEAHEMGXGSFKYAWVLDXLXADRXRGIXID 346
HVD+GKST GHL++ +D RTI F EA G SF YAWVLD +R RG+ +D
Sbjct: 178 HVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMD 237
Query: 347 IALWKFQT 370
I F+T
Sbjct: 238 IGRTSFET 245
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/68 (48%), Positives = 41/68 (60%)
Frame = +2
Query: 167 HVDSGKSTTTGHLIYKCGGIDXRTIXXFXXEAHEMGXGSFKYAWVLDXLXADRXRGIXID 346
HVD+GKST GHL++ +D RTI F EA G SF YAWVLD +R RG+ +D
Sbjct: 196 HVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMD 255
Query: 347 IALWKFQT 370
I F+T
Sbjct: 256 IGRTSFET 263
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 54.0 bits (124), Expect = 2e-07
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = +2
Query: 125 GKEXTHINHCPSSRHVDSGKSTTTGHLIYKCGGIDXRTIXXFXXEAHEMGXGSFKYAWVL 304
G HIN HVD+GKST G L++ G +D RT+ + EA E G S+ +W +
Sbjct: 104 GTHKEHINMVFVG-HVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCM 162
Query: 305 DXLXADRXRGIXIDIALWKFQT 370
D +R +G +++ F+T
Sbjct: 163 DTNDEEREKGKTVEVGRAYFET 184
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 39.5 bits (88), Expect = 0.004
Identities = 22/64 (34%), Positives = 26/64 (40%)
Frame = +1
Query: 598 PPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPXX 777
PPTT P P + +P PQ E + PPP P TP+ P PP PP
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPP--PPPPLPPIATPSSVPPPPPPPPPPPP 523
Query: 778 GXPQ 789
Q
Sbjct: 524 ALEQ 527
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 36.3 bits (80), Expect = 0.036
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +1
Query: 598 PPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
PPTT P P + +P PQ E + PPP P TP+ + P PP PP
Sbjct: 459 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPP--PPPPLPPIATPS--SVPPPPPPPP 512
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.34
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +2
Query: 161 SRHVDSGKSTTTGHLIYKCGGIDXRTIXXFXXEAHEMGXGSFKYAWVLDXLXADRXRGIX 340
S H+DSGK+T T ++Y G ID HE+ G +D + +R RGI
Sbjct: 50 SAHIDSGKTTVTERILYYAGRID---------SMHEV-RGKDDVGATMDFMDLERQRGIT 99
Query: 341 IDIA 352
I A
Sbjct: 100 IQSA 103
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.59
Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +1
Query: 598 PPTTMXXHPXPRTSPXAXAPGPQSXEX-TAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPX 774
PP T P P P P P + PPP P P P PP PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP-PPPP 765
Query: 775 XGXPQXP 795
G P P
Sbjct: 766 GGCPPPP 772
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.59
Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +1
Query: 598 PPTTMXXHPXPRTSPXAXAPGPQSXEX-TAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPX 774
PP T P P P P P + PPP P P P PP PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP-PPPP 765
Query: 775 XGXPQXP 795
G P P
Sbjct: 766 GGCPPPP 772
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.59
Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +1
Query: 598 PPTTMXXHPXPRTSPXAXAPGPQSXEX-TAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPX 774
PP T P P P P P + PPP P P P PP PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP-PPPP 348
Query: 775 XGXPQXP 795
G P P
Sbjct: 349 GGCPPPP 355
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 31.9 bits (69), Expect = 0.78
Identities = 21/75 (28%), Positives = 25/75 (33%), Gaps = 7/75 (9%)
Frame = +1
Query: 598 PPTTMXXHPXPRTSPXAXAPG--PQSXEXTAXLXH-----LPPPXXXPXTTPAXXTYPXP 756
PPT P P +P G P ++ H PPP P + P P
Sbjct: 114 PPTASSAPPVPPPAPVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKPTP 173
Query: 757 PIXPPXXGXPQXPRE 801
P PP P RE
Sbjct: 174 PPPPPAQQKPSSDRE 188
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 1.0
Identities = 18/65 (27%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +3
Query: 639 PXXPRPRPAIXRXHGXPPPPXTTXXXSXHNACAXHLPX--PPHXPTXXGPXPXAXGAPLH 812
P P+ P + PPPP P PP P P P G+P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 813 PTHPR 827
P PR
Sbjct: 300 PPPPR 304
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPI--X 765
P PP T P P SP P P PPP P +P + P P
Sbjct: 264 PPPPRTGSPPPPPTGSPP---PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS 320
Query: 766 PPXXGXPQXP 795
PP G P
Sbjct: 321 PPPAGTGSPP 330
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPP 759
P PP P PR P P+ T L PPP PA P PP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL---PPPQAGGSPPPAGTGSPPPP 332
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Frame = +3
Query: 639 PXXPRPRPAIXRXHGXPPPPXTTXXXSXHNACAXHLPXPPH--XPTXXGPXPXAXGAP 806
P PR G PPPP A + P PP PT P P A G+P
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 321
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 1.0
Identities = 18/65 (27%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +3
Query: 639 PXXPRPRPAIXRXHGXPPPPXTTXXXSXHNACAXHLPX--PPHXPTXXGPXPXAXGAPLH 812
P P+ P + PPPP P PP P P P G+P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 813 PTHPR 827
P PR
Sbjct: 321 PPPPR 325
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPI--X 765
P PP T P P SP P P PPP P +P + P P
Sbjct: 285 PPPPRTGSPPPPPTGSPP---PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS 341
Query: 766 PPXXGXPQXP 795
PP G P
Sbjct: 342 PPPAGTGSPP 351
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPP 759
P PP P PR P P+ T L PPP PA P PP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL---PPPQAGGSPPPAGTGSPPPP 353
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Frame = +3
Query: 639 PXXPRPRPAIXRXHGXPPPPXTTXXXSXHNACAXHLPXPPH--XPTXXGPXPXAXGAP 806
P PR G PPPP A + P PP PT P P A G+P
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 342
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 1.0
Identities = 18/65 (27%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +3
Query: 639 PXXPRPRPAIXRXHGXPPPPXTTXXXSXHNACAXHLPX--PPHXPTXXGPXPXAXGAPLH 812
P P+ P + PPPP P PP P P P G+P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 813 PTHPR 827
P PR
Sbjct: 306 PPPPR 310
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPI--X 765
P PP T P P SP P P PPP P +P + P P
Sbjct: 270 PPPPRTGSPPPPPTGSPP---PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS 326
Query: 766 PPXXGXPQXP 795
PP G P
Sbjct: 327 PPPAGTGSPP 336
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPP 759
P PP P PR P P+ T L PPP PA P PP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL---PPPQAGGSPPPAGTGSPPPP 338
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Frame = +3
Query: 639 PXXPRPRPAIXRXHGXPPPPXTTXXXSXHNACAXHLPXPPH--XPTXXGPXPXAXGAP 806
P PR G PPPP A + P PP PT P P A G+P
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 327
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 31.5 bits (68), Expect = 1.0
Identities = 21/80 (26%), Positives = 27/80 (33%)
Frame = +1
Query: 571 CXXGXLRPGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYP 750
C G + P PP + P SP + P + +A P P P P
Sbjct: 1409 CIEGAV-PSPPPSSSRFSTPPVSPVSSCPSSRFSSPSATRPQSPDP--VPAAPAENCDLP 1465
Query: 751 XPPIXPPXXGXPQXPREXLS 810
PP PP G R+ S
Sbjct: 1466 PPPPEPPLPGEDTPSRKSSS 1485
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +1
Query: 628 PRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXP-PIXPPXXGXPQXP 795
P ++P P P + A L PPP P TP+ P P P+ P Q P
Sbjct: 494 PSSAPVHTPPAPPAIPSPAKLPTAPPPVEKP-VTPSPSASPLPSPVSSPAPQLVQKP 549
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/63 (28%), Positives = 20/63 (31%)
Frame = +1
Query: 580 GXLRPGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPP 759
G P PP P P P P P S + +PPP P P PP
Sbjct: 294 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Query: 760 IXP 768
P
Sbjct: 354 RYP 356
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +1
Query: 580 GXLRPGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPP 759
G P PP P P P P+ + PPP P TP P P
Sbjct: 258 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 317
Query: 760 IXPP 771
PP
Sbjct: 318 PPPP 321
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/63 (28%), Positives = 20/63 (31%)
Frame = +1
Query: 580 GXLRPGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPP 759
G P PP P P P P P S + +PPP P P PP
Sbjct: 304 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Query: 760 IXP 768
P
Sbjct: 364 RYP 366
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +1
Query: 580 GXLRPGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPP 759
G P PP P P P P+ + PPP P TP P P
Sbjct: 268 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 327
Query: 760 IXPP 771
PP
Sbjct: 328 PPPP 331
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.8
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 7/66 (10%)
Frame = +1
Query: 592 PGPPTT----MXXHPXPRTSPX-AXAPGPQSXEXTAXLXHL--PPPXXXPXTTPAXXTYP 750
P PPTT P P+ +P A AP P + E T P P TP P
Sbjct: 207 PPPPTTNKEVTTVAPVPKPAPVTAPAPNPPAPENTTAKVETTKPTKAAPPAPTPVPNPVP 266
Query: 751 XPPIXP 768
PP P
Sbjct: 267 SPPPPP 272
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/68 (27%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXT---TPAXXTYPXPPI 762
P PP + + P AP + E PPP P + P P PP
Sbjct: 575 PPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPP 634
Query: 763 XPPXXGXP 786
PP G P
Sbjct: 635 PPPPMGLP 642
Score = 30.3 bits (65), Expect = 2.4
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 639 PXXPRPRPAIXRXHGXPPPPXTTXXXSXHNA-CAXHLPXPPHXPTXXGPXPXAXGAPLHP 815
P P R H PPPP S A + P PP P G GAP P
Sbjct: 593 PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 652
Query: 816 THP 824
P
Sbjct: 653 PPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/68 (27%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXT---TPAXXTYPXPPI 762
P PP + + P AP + E PPP P + P P PP
Sbjct: 401 PPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPP 460
Query: 763 XPPXXGXP 786
PP G P
Sbjct: 461 PPPPMGLP 468
Score = 30.3 bits (65), Expect = 2.4
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 639 PXXPRPRPAIXRXHGXPPPPXTTXXXSXHNA-CAXHLPXPPHXPTXXGPXPXAXGAPLHP 815
P P R H PPPP S A + P PP P G GAP P
Sbjct: 419 PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 478
Query: 816 THP 824
P
Sbjct: 479 PPP 481
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/69 (28%), Positives = 22/69 (31%)
Frame = +1
Query: 589 RPGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXP 768
RP PP P P + A G +PPP P P PP P
Sbjct: 532 RPAPPPVSSIPPPPPIAGLLAANGTNVP--------IPPPPPPPLPQNLSGAPPPPPPPP 583
Query: 769 PXXGXPQXP 795
P G P P
Sbjct: 584 PMLGGPPPP 592
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.9 bits (64), Expect = 3.2
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = +1
Query: 601 PTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPXXG 780
PTT P P P P PQ + +PP P P P PP PP
Sbjct: 318 PTTFILPPPP--PPMKLDPSPQPAATPVEITEIPPIISPPAPPP-----PPPP--PPPPP 368
Query: 781 XPQXP 795
PQ P
Sbjct: 369 PPQTP 373
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 29.5 bits (63), Expect = 4.2
Identities = 18/66 (27%), Positives = 24/66 (36%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPP 771
P PP+ P P+++P GP + TA P T A P PP P
Sbjct: 587 PSPPSP-EPEPEPKSTPEPVTDGPNESQSTALPQQTTDAPVDP-VTEASPLNPQPPPPPS 644
Query: 772 XXGXPQ 789
P+
Sbjct: 645 PSPEPE 650
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/61 (27%), Positives = 22/61 (36%)
Frame = +3
Query: 648 PRPRPAIXRXHGXPPPPXTTXXXSXHNACAXHLPXPPHXPTXXGPXPXAXGAPLHPTHPR 827
P PRP + PP P + +P PP P + P+HPT P
Sbjct: 114 PPPRPPKPEQYKFPPAPSVPLLHDRY-----FVPPPPPVPPRHSRVQQSPPVPIHPTPPV 168
Query: 828 S 830
S
Sbjct: 169 S 169
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/61 (27%), Positives = 22/61 (36%)
Frame = +3
Query: 648 PRPRPAIXRXHGXPPPPXTTXXXSXHNACAXHLPXPPHXPTXXGPXPXAXGAPLHPTHPR 827
P PRP + PP P + +P PP P + P+HPT P
Sbjct: 114 PPPRPPKPEQYKFPPAPSVPLLHDRY-----FVPPPPPVPPRHSRVQQSPPVPIHPTPPV 168
Query: 828 S 830
S
Sbjct: 169 S 169
>U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical
protein F56D3.1 protein.
Length = 441
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/71 (28%), Positives = 27/71 (38%)
Frame = +1
Query: 589 RPGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXP 768
RP P TT+ P +T+P A P + T P P+ P P P
Sbjct: 121 RPPPATTIRTIPFVQTTPATFATLPPAPAVTRAPIQPFVPQTVATIAPS-FVRPQVPTAP 179
Query: 769 PXXGXPQXPRE 801
P PQ P++
Sbjct: 180 PRVIAPQQPQQ 190
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 5.5
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 6/65 (9%)
Frame = +1
Query: 619 HPXPRTSPXAXAPGPQSXEXTAXLX--H--LPPPXXXPXTTPAXXTYPXPPIXP--PXXG 780
HP P P PG + + A H PPP P + A + P PP P P
Sbjct: 91 HPHPYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTP 150
Query: 781 XPQXP 795
P+ P
Sbjct: 151 PPRSP 155
>AC006714-1|AAK29717.2| 240|Caenorhabditis elegans Hypothetical
protein Y119D3B.13 protein.
Length = 240
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 227 QYHHICRSNDQWWWTXRSRRVAMTDND*CESXPC 126
QY C WW R+RR + D+D C S C
Sbjct: 175 QYSATCGPEVSWWACERTRRGLLIDSD-CPSDSC 207
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 28.7 bits (61), Expect = 7.3
Identities = 19/66 (28%), Positives = 20/66 (30%)
Frame = +1
Query: 598 PPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPXX 777
P T P+T P P T PPP P T P T P PP
Sbjct: 368 PKTDPPRTEPPKTEPPTTEPPKIEPPRTEPPKTEPPPTEPPKTEPPKTT--PPKTEPPTT 425
Query: 778 GXPQXP 795
P P
Sbjct: 426 EPPNIP 431
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +1
Query: 598 PPTTMXXH-PXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTY 747
PPTT PRT P P P T PP P T P Y
Sbjct: 382 PPTTEPPKIEPPRTEPPKTEPPPTEPPKTEPPKTTPPKTEPPTTEPPNIPY 432
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 7.3
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 11/71 (15%)
Frame = +1
Query: 592 PGPPTTMXX-------HPXPRTSPXAXAPGPQSXEXTAXLXHL----PPPXXXPXTTPAX 738
PGPP+++ P P S AP P + + PPP P P
Sbjct: 473 PGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLS 532
Query: 739 XTYPXPPIXPP 771
P PP PP
Sbjct: 533 TGAPTPPPPPP 543
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 7.3
Identities = 21/64 (32%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Frame = +1
Query: 598 PPTTMXXHPXPRTSPXAXAPGPQ-SXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPX 774
PP H P +P AP PQ + A PPP P P P PP PP
Sbjct: 98 PPAPYPQHAVPAPAPPP-APYPQHAVPAPAPYQQQPPPPPPPPHYP-----PPPPHYPPP 151
Query: 775 XGXP 786
P
Sbjct: 152 PPAP 155
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 7.3
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = +1
Query: 607 TMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPIXPPXXGXP 786
+M P P P AP P L PPP P P P PP PP P
Sbjct: 24 SMGPPPCPPPPPPMCAPPP--------LPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCP 75
Query: 787 QXP 795
P
Sbjct: 76 PPP 78
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 7.3
Identities = 19/70 (27%), Positives = 23/70 (32%), Gaps = 7/70 (10%)
Frame = +1
Query: 598 PPTTMXXHPXPRTSPXAXAPG--PQSXEXTAXLXH-----LPPPXXXPXTTPAXXTYPXP 756
PPT P P +P G P ++ H PPP P + P P
Sbjct: 114 PPTASSAPPVPPPAPVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKPTP 173
Query: 757 PIXPPXXGXP 786
P PP P
Sbjct: 174 PPPPPAQQKP 183
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 28.7 bits (61), Expect = 7.3
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Frame = +1
Query: 655 PGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPXPPI-XPPXXGXPQXPREXL 807
P A + PPP P TT T PP PP P P L
Sbjct: 117 PAVSGTSPPAPVDQKPPPCIPPTTTTTTTTTTRPPCPYPPATNTPPAPEPTL 168
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.3 bits (60), Expect = 9.7
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Frame = +1
Query: 598 PPTTMXX-HPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPX-PPIXPP 771
PP M +P PR P A APG ++PPP P PP PP
Sbjct: 151 PPRGMPGAYPPPRGYPPAPAPG----------VYMPPPGMPGAYPPPRMPIGHGPPGGPP 200
Query: 772 XXGXPQXPR 798
G PQ R
Sbjct: 201 MPGPPQRSR 209
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.3 bits (60), Expect = 9.7
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Frame = +1
Query: 598 PPTTMXX-HPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYPX-PPIXPP 771
PP M +P PR P A APG ++PPP P PP PP
Sbjct: 151 PPRGMPGAYPPPRGYPPAPAPG----------VYMPPPGMPGAYPPPRMPIGHGPPGGPP 200
Query: 772 XXGXPQXPR 798
G PQ R
Sbjct: 201 MPGPPQRSR 209
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.3 bits (60), Expect = 9.7
Identities = 21/72 (29%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHL---PPPXXXPXTTPAXXTYPXPPI 762
PG P M P P A AP E + + PPP P P PP
Sbjct: 82 PGSPPGMAGPPL---LPPAVAPPTNGQETLVGINNPVQPPPPVQYQNQGPQYIEAPPPPP 138
Query: 763 XPPXXGXPQXPR 798
PP P P+
Sbjct: 139 SPPPPPPPPPPQ 150
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 28.3 bits (60), Expect = 9.7
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +1
Query: 592 PGPPTTMXXHPXPRTSPXAXAPGPQSXEXTAXLXHLPPPXXXPXTTPAXXTYP--XPPIX 765
P PP P P +P A A P + P P P PA YP PP
Sbjct: 40 PCPPQYAPLPPPPMPAP-APAYNPYPCANPPCIVVEPMPVAPPAPAPAYNPYPCATPPCP 98
Query: 766 PPXXGXPQXP 795
P P P
Sbjct: 99 LPYIPEPVAP 108
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 167 HVDSGKSTTTGHLIYKCGGI 226
HVD+GK+T T L+Y G I
Sbjct: 33 HVDAGKTTVTERLLYLAGAI 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,478,653
Number of Sequences: 27780
Number of extensions: 237001
Number of successful extensions: 1068
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2793417546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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