Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_L05
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81077-5|CAB03065.1|  151|Caenorhabditis elegans Hypothetical pr...   167   7e-42

>Z81077-5|CAB03065.1|  151|Caenorhabditis elegans Hypothetical
           protein F36A2.6 protein.
          Length = 151

 Score =  167 bits (407), Expect = 7e-42
 Identities = 78/120 (65%), Positives = 93/120 (77%)
 Frame = +1

Query: 163 LXMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMII 342
           L M  EQ  +L+          GLKRK +AL+ K+++AKK A   EKP  VKTHLR+MII
Sbjct: 32  LDMSREQFTKLLPCRMRRRLDRGLKRKHLALIAKVQKAKKAAGVLEKPATVKTHLRDMII 91

Query: 343 VPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 522
           +PE+VG ++GIYNGK FNQ EIKPEMIG YLGEF+++YKPVKHGRPGIGATHSSRFIPLK
Sbjct: 92  LPELVGGVIGIYNGKVFNQTEIKPEMIGFYLGEFAISYKPVKHGRPGIGATHSSRFIPLK 151



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = +3

Query: 102 LKXKRIFRKFTYRGVDLDQLL 164
           LK KR FRKF YRGVDLDQLL
Sbjct: 12  LKKKRTFRKFMYRGVDLDQLL 32


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,347,107
Number of Sequences: 27780
Number of extensions: 211626
Number of successful extensions: 515
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)