Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_L03
(934 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 127 2e-29
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 127 2e-29
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 127 2e-29
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 121 2e-27
BT023805-1|AAZ66312.1| 623|Drosophila melanogaster RE55817p pro... 29 9.1
AY069787-1|AAL39932.1| 623|Drosophila melanogaster SD02907p pro... 29 9.1
AE014134-2026|AAS64677.1| 969|Drosophila melanogaster CG4705-PB... 29 9.1
AE014134-2025|AAF53065.2| 989|Drosophila melanogaster CG4705-PA... 29 9.1
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 127 bits (307), Expect = 2e-29
Identities = 67/112 (59%), Positives = 73/112 (65%)
Frame = +3
Query: 132 MVSKAELACVYSALILVDXXVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 311
M +KAELACVY++LILVD VAVTGEKI+TILKAA V+V PYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 312 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 467
TNIGSGV SDDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 127 bits (307), Expect = 2e-29
Identities = 67/112 (59%), Positives = 73/112 (65%)
Frame = +3
Query: 132 MVSKAELACVYSALILVDXXVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 311
M +KAELACVY++LILVD VAVTGEKI+TILKAA V+V PYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 312 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 467
TNIGSGV SDDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 127 bits (307), Expect = 2e-29
Identities = 67/112 (59%), Positives = 73/112 (65%)
Frame = +3
Query: 132 MVSKAELACVYSALILVDXXVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 311
M +KAELACVY++LILVD VAVTGEKI+TILKAA V+V PYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 312 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 467
TNIGSGV SDDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 121 bits (291), Expect = 2e-27
Identities = 65/112 (58%), Positives = 71/112 (63%)
Frame = +3
Query: 132 MVSKAELACVYSALILVDXXVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 311
M +KAELA VY++LILVD VAVTGEKI+TILKAA V+V PYWPGLFAKALE INV+DLI
Sbjct: 1 MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLI 60
Query: 312 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 467
TNIGSGV SDDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>BT023805-1|AAZ66312.1| 623|Drosophila melanogaster RE55817p
protein.
Length = 623
Score = 29.1 bits (62), Expect = 9.1
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +2
Query: 98 RPTATCTFKTKNGVKS*ISMCLLCSHPGGXXCCRNW*ENFHHLESGGCRC 247
RP C + VK + CL C H G W E + + GC+C
Sbjct: 563 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 611
>AY069787-1|AAL39932.1| 623|Drosophila melanogaster SD02907p
protein.
Length = 623
Score = 29.1 bits (62), Expect = 9.1
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +2
Query: 98 RPTATCTFKTKNGVKS*ISMCLLCSHPGGXXCCRNW*ENFHHLESGGCRC 247
RP C + VK + CL C H G W E + + GC+C
Sbjct: 563 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 611
>AE014134-2026|AAS64677.1| 969|Drosophila melanogaster CG4705-PB,
isoform B protein.
Length = 969
Score = 29.1 bits (62), Expect = 9.1
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +2
Query: 98 RPTATCTFKTKNGVKS*ISMCLLCSHPGGXXCCRNW*ENFHHLESGGCRC 247
RP C + VK + CL C H G W E + + GC+C
Sbjct: 909 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 957
>AE014134-2025|AAF53065.2| 989|Drosophila melanogaster CG4705-PA,
isoform A protein.
Length = 989
Score = 29.1 bits (62), Expect = 9.1
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +2
Query: 98 RPTATCTFKTKNGVKS*ISMCLLCSHPGGXXCCRNW*ENFHHLESGGCRC 247
RP C + VK + CL C H G W E + + GC+C
Sbjct: 929 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 977
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,666,479
Number of Sequences: 53049
Number of extensions: 309453
Number of successful extensions: 603
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4607820675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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