Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_L02
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0028 - 8311041-8311709,8312175-8312478,8314768-8314841           29   3.5  
12_01_1022 - 10435409-10435564,10435950-10436219,10436820-104371...    28   8.2  
01_07_0206 + 41990251-41992032,41992131-41992361                       28   8.2  

>10_05_0028 - 8311041-8311709,8312175-8312478,8314768-8314841
          Length = 348

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
 Frame = +2

Query: 233 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTGQAYGTR--VLGPAGDXTNYGGRLD 406
           GGG   G       G +G  GY  +     RG + G + G R  V G  GD  NYGG   
Sbjct: 149 GGGGYSGQGTYGGGGGYGGGGYGGQDAYGGRG-VGGYSEGGRGYVGGGYGDGNNYGGYNT 207

Query: 407 WANKNAEAAIDINRQIGGRSGMTATGSG 490
               N+E          G  G  + G+G
Sbjct: 208 SGGYNSEGGRGGYSVFEGGHGYGSGGTG 235


>12_01_1022 -
           10435409-10435564,10435950-10436219,10436820-10437125,
           10437932-10438057,10439825-10439893,10440443-10440487,
           10440717-10440776,10441527-10441589,10442186-10442266,
           10442494-10442916
          Length = 532

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 7/77 (9%)
 Frame = -2

Query: 428 LPHSYWPSLDVHRSLYXPLQVPG-------PWCRRPARSICRGHH*RSLCCNRLYQKAHH 270
           +P  ++P+  ++  +Y   ++PG        +  RP +  C+       C  R+  K HH
Sbjct: 402 VPFQHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHH 461

Query: 269 RFGPACRRPSLXPLVCP 219
              P     +L PL  P
Sbjct: 462 PRSPVPPAGALSPLGLP 478


>01_07_0206 + 41990251-41992032,41992131-41992361
          Length = 670

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = +2

Query: 167 GXPISGHFSKRHPRDVTWDKQVGG-----GKVFGTLGQNDDGLFGKAGYNREIFNDDRGK 331
           G P+    S+R  R   W++Q+GG      +++G     D  L     +NR+  N D+  
Sbjct: 222 GKPMEDFDSERSRRACLWERQIGGRGDDVNELYGPSSCKD--LLTLYNFNRQYVNMDKTW 279

Query: 332 LTGQA 346
           L+ QA
Sbjct: 280 LSKQA 284


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,404,966
Number of Sequences: 37544
Number of extensions: 387671
Number of successful extensions: 1041
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)