Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_K22
         (902 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g52950.1 68416.m05837 CBS domain-containing protein / octicos...    32   0.60 
At3g02970.1 68416.m00292 phosphate-responsive 1 family protein s...    32   0.60 
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex...    29   4.2  
At1g73730.1 68414.m08537 ethylene-insensitive3-like3 (EIL3) iden...    28   7.4  
At1g03260.1 68414.m00304 expressed protein                             28   7.4  
At3g20770.1 68416.m02627 ethylene-insensitive 3 (EIN3) identical...    28   9.7  
At2g23130.2 68415.m02759 arabinogalactan-protein (AGP17) identic...    28   9.7  
At2g23130.1 68415.m02760 arabinogalactan-protein (AGP17) identic...    28   9.7  

>At3g52950.1 68416.m05837 CBS domain-containing protein /
           octicosapeptide/Phox/Bemp1 (PB1) domain-containing
           protein contains Pfam profiles: PF00571 CBS domain,
           PF00564: PB1 domain
          Length = 556

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +2

Query: 212 PPCRSTKRNEHFQPRXKEXSRKRPTALQXATNGQSTPKESPEPQIQQETPAAAERAPK 385
           P   S +R+     R    S+K   +   + NG ++   SP PQ Q + P+  ER  K
Sbjct: 8   PSSTSGRRSNSTVRRGPPPSKKPVQSENGSVNGNTSKPNSPPPQPQSQAPSNGERTVK 65


>At3g02970.1 68416.m00292 phosphate-responsive 1 family protein
           similar to phi-1 (phosphate-induced gene) [Nicotiana
           tabacum] GI:3759184; contains Pfam profile PF04674:
           Phosphate-induced protein 1 conserved region
          Length = 332

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +3

Query: 72  KSKNKMXSTPFNVGLNXGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTF- 248
           KS  K  +TP+N  +      SS  +  P    T +F S   P  TGR  V P     F 
Sbjct: 247 KSLFKSETTPYNDDVKKNHESSSMYIVDPATKCTRVFGSGAFPGFTGRIRVDPITGGAFN 306

Query: 249 SHG 257
           SHG
Sbjct: 307 SHG 309


>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 956

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +2

Query: 203 EDRPPCRSTKRNEHFQPRXKEXSRKRPTALQXATNG-QSTPK-ESPEPQIQQETPAAAER 376
           E +P     +  +  QP+ K  S K+ +  Q A    Q  PK ESP+ +  ++ P   E 
Sbjct: 462 EPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQESSKQEPPKPEE 521

Query: 377 APKAD 391
           +PK +
Sbjct: 522 SPKPE 526


>At1g73730.1 68414.m08537 ethylene-insensitive3-like3 (EIL3)
           identical to ethylene-insensitive3-like3 (EIL3)
           GB:AF004215 [Arabidopsis thaliana] (Cell 89 (7),
           1133-1144 (1997))
          Length = 567

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 113 PQXRSSSIKQGAPPPWW 163
           P  R   +++G PPPWW
Sbjct: 187 PPQRKYPLEKGTPPPWW 203


>At1g03260.1 68414.m00304 expressed protein
          Length = 274

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 652 VFPTLPFEMINVVLSASDARIG 717
           V P LPF M+N +LS +  R+G
Sbjct: 142 VVPILPFNMLNYLLSVTPVRLG 163


>At3g20770.1 68416.m02627 ethylene-insensitive 3 (EIN3) identical to
           ethylene-insensitive3 GI:2224933 from [Arabidopsis
           thaliana]
          Length = 628

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 113 PQXRSSSIKQGAPPPWW 163
           P  R   +++G PPPWW
Sbjct: 199 PPQRRFPLEKGVPPPWW 215


>At2g23130.2 68415.m02759 arabinogalactan-protein (AGP17) identical
           to gi_11935086_gb_AAG41963
          Length = 162

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +2

Query: 314 STPKESPE-PQIQQETPAAAERAPKAD 391
           STP+ SP  P  + +TP+A E AP AD
Sbjct: 78  STPQISPPAPSPEADTPSAPEIAPSAD 104


>At2g23130.1 68415.m02760 arabinogalactan-protein (AGP17) identical
           to gi_11935086_gb_AAG41963
          Length = 185

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +2

Query: 314 STPKESPE-PQIQQETPAAAERAPKAD 391
           STP+ SP  P  + +TP+A E AP AD
Sbjct: 78  STPQISPPAPSPEADTPSAPEIAPSAD 104


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,957,366
Number of Sequences: 28952
Number of extensions: 296750
Number of successful extensions: 806
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2129873112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)