Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_K19
(906 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7) 51 1e-06
SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_56553| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15) 34 0.18
SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19) 33 0.32
SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_22764| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 32 0.55
SB_6339| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 32 0.55
SB_49496| Best HMM Match : DUF81 (HMM E-Value=3.6) 32 0.55
SB_49132| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_21539| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05) 32 0.55
SB_36015| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_11991| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_52019| Best HMM Match : Collagen (HMM E-Value=1.3) 30 2.2
SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_45385| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_32080| Best HMM Match : Plasmid_stabil (HMM E-Value=5.7) 29 6.8
SB_31888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_21115| Best HMM Match : Swi3 (HMM E-Value=6.9) 29 6.8
SB_15857| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_864| Best HMM Match : Sulfotransfer_1 (HMM E-Value=6.4e-05) 29 6.8
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 28 9.0
SB_56846| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_89| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7)
Length = 203
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1
Query: 667 CINXSATPRGXAVCVLGALPLPRSLTXXXXSF 762
CIN SA RG AVCVLGALPLPRSLT SF
Sbjct: 100 CINESANARGEAVCVLGALPLPRSLTRCARSF 131
>SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1
Query: 667 CINXSATPRGXAVCVLGALPLPRSLTXXXXSF 762
CIN SA RG AVCVLGALPLPRSLT SF
Sbjct: 464 CINESANARGEAVCVLGALPLPRSLTRCARSF 495
>SB_56553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 33.9 bits (74), Expect = 0.18
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +3
Query: 693 GXXGLRIGRPSASSLTDSLXXV 758
G GLRIGR SASSLTDSL V
Sbjct: 51 GPGGLRIGRSSASSLTDSLRSV 72
>SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15)
Length = 884
Score = 33.9 bits (74), Expect = 0.18
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +3
Query: 693 GXXGLRIGRPSASSLTDSLXXV 758
G GLRIGR SASSLTDSL V
Sbjct: 34 GGGGLRIGRSSASSLTDSLRSV 55
>SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19)
Length = 623
Score = 33.1 bits (72), Expect = 0.32
Identities = 17/24 (70%), Positives = 17/24 (70%)
Frame = +3
Query: 687 PXGXXGLRIGRPSASSLTDSLXXV 758
P GLRIGR SASSLTDSL V
Sbjct: 571 PKKPGGLRIGRSSASSLTDSLRSV 594
>SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 32.7 bits (71), Expect = 0.42
Identities = 18/26 (69%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +3
Query: 684 HPXGXX-GLRIGRPSASSLTDSLXXV 758
+P G GLRIGR SASSLTDSL V
Sbjct: 203 YPKGLPSGLRIGRSSASSLTDSLRSV 228
>SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 702 GLRIGRPSASSLTDSLXXV 758
GLRIGR SASSLTDSL V
Sbjct: 449 GLRIGRSSASSLTDSLRSV 467
>SB_22764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 702 GLRIGRPSASSLTDSLXXV 758
GLRIGR SASSLTDSL V
Sbjct: 8 GLRIGRSSASSLTDSLRSV 26
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 702 GLRIGRPSASSLTDSLXXV 758
GLRIGR SASSLTDSL V
Sbjct: 3 GLRIGRSSASSLTDSLRSV 21
>SB_6339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 702 GLRIGRPSASSLTDSLXXV 758
GLRIGR SASSLTDSL V
Sbjct: 3 GLRIGRSSASSLTDSLRSV 21
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 702 GLRIGRPSASSLTDSLXXV 758
GLRIGR SASSLTDSL V
Sbjct: 310 GLRIGRSSASSLTDSLRSV 328
>SB_49496| Best HMM Match : DUF81 (HMM E-Value=3.6)
Length = 302
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 702 GLRIGRPSASSLTDSLXXV 758
GLRIGR SASSLTDSL V
Sbjct: 255 GLRIGRSSASSLTDSLRSV 273
>SB_49132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 702 GLRIGRPSASSLTDSLXXV 758
GLRIGR SASSLTDSL V
Sbjct: 141 GLRIGRSSASSLTDSLRSV 159
>SB_21539| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 702 GLRIGRPSASSLTDSLXXV 758
GLRIGR SASSLTDSL V
Sbjct: 3 GLRIGRSSASSLTDSLRSV 21
>SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2429
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 702 GLRIGRPSASSLTDSLXXV 758
GLRIGR SASSLTDSL V
Sbjct: 264 GLRIGRSSASSLTDSLRSV 282
>SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05)
Length = 117
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 702 GLRIGRPSASSLTDSLXXV 758
GLRIGR SASSLTDSL V
Sbjct: 70 GLRIGRSSASSLTDSLRSV 88
>SB_36015| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 31.5 bits (68), Expect = 0.97
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Frame = +2
Query: 596 KQVTXXHCIHFMFQVQGEVW------EVFSALMXXPPXGXXRFAYWA 718
+ + +C+ F GE++ V +ALM P G RFAYWA
Sbjct: 102 EDIDGNYCLQFYLHKSGEIYWLVGKPVVPAALMNRPTRGERRFAYWA 148
>SB_11991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = +2
Query: 605 TXXHCIHFMFQVQGEVWEVFSALMXXPPXGXXRFAYWA 718
T HCI F V +ALM P G RFAYWA
Sbjct: 27 TGFHCILVSFGYSVGKPVVPAALMNRPTRGERRFAYWA 64
>SB_52019| Best HMM Match : Collagen (HMM E-Value=1.3)
Length = 99
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 181 ENGGDSPDGEVAPGVDPVKVVDEDHGVNIVDGEPGGQYRDGGE 309
+NG D DG+V V D D G N+ DG+ G DGG+
Sbjct: 25 DNGDDGDDGDVDDNVCDGDGDDGDDGDNVCDGD--GDDGDGGD 65
>SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 157 AXVAVNSQENGGDSPDGEVAPGVDPVKVVDEDHGVNIVDGEPGGQYRDGGE 309
A VA ++ + GD+ DG G D D+D G + + GG DGG+
Sbjct: 185 ADVASSAVADNGDNDDGSDDDGGDNDDGSDDDDGGDDGSDDDGGDNDDGGD 235
>SB_45385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 47
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 705 LRIGRPSASSLTDSLXXV 758
+RIGR SASSLTDSL V
Sbjct: 1 MRIGRSSASSLTDSLRSV 18
>SB_32080| Best HMM Match : Plasmid_stabil (HMM E-Value=5.7)
Length = 284
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 572 FVTIISCNKQVTXXHCIHFMFQVQGEVWEVFSALMXXPPXGXXRFAYWA 718
F+++I V+ I+ + V V +ALM P G RFAYWA
Sbjct: 158 FLSLIPKTNNVSLIEAINTTLPIGKPV--VPAALMNRPTRGERRFAYWA 204
>SB_31888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 539 FICEICDAIALFVTIISCNKQVTXXHCIHFMFQVQGEVWE---VFSALMXXPPXGXXRFA 709
F+C + ++ + I CN ++ + FM + + V +ALM P G RFA
Sbjct: 172 FVCNMLLSMGTMLLFI-CNMMLSMGTMLLFMCNMLLSMVGKPVVPAALMNRPTRGERRFA 230
Query: 710 YWA 718
YWA
Sbjct: 231 YWA 233
>SB_21115| Best HMM Match : Swi3 (HMM E-Value=6.9)
Length = 125
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 593 NKQVTXXHCIHFMFQVQGEVWE--VFSALMXXPPXGXXRFAYWA 718
NK +T C+ Q+ E + V +ALM P G RFAYWA
Sbjct: 3 NKSITSLDCLT-KAQLVEEFGKPVVPAALMNRPTRGERRFAYWA 45
>SB_15857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 617 CIHF--MFQVQGEVWEVFSALMXXPPXGXXRFAYWA 718
CI F +F+V V V +ALM P G RFAYWA
Sbjct: 129 CISFTRIFRVGKPV--VPAALMNRPTRGERRFAYWA 162
>SB_864| Best HMM Match : Sulfotransfer_1 (HMM E-Value=6.4e-05)
Length = 524
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
Frame = +2
Query: 599 QVTXXHCIHFMFQV-----QGEVWE--VFSALMXXPPXGXXRFAYWA 718
+V HC H M ++ G + + V +ALM P G RFAYWA
Sbjct: 277 RVVEKHCKHLMDRLGYKTLDGSLGKPVVPAALMNRPTRGERRFAYWA 323
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 181 ENGGDSPDGEVA--PGVDPVKVVDEDHGVNIVDGEPGGQYRDGGE 309
+ GGD DG+ GVD V D+ G + G+ GG DGG+
Sbjct: 3 DGGGDGDDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGGDDDGGD 47
>SB_56846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 569 LFVTIISCNKQVTXXHCIHFMFQVQGEVWE--VFSALMXXPPXGXXRFAYWA 718
+FV + + + + + Q +V + V +ALM P G RFAYWA
Sbjct: 18 IFVVVQAFKEWTLCFEAMEMYLEDQNKVGKPVVPAALMNRPTRGERRFAYWA 69
>SB_89| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 656 EVFSALMXXPPXGXXRFAYWA 718
+V +ALM P G RFAYWA
Sbjct: 5 DVPAALMNRPTRGERRFAYWA 25
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,253,366
Number of Sequences: 59808
Number of extensions: 244856
Number of successful extensions: 1742
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2609867019
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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