Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_K19
         (906 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g36390.1 68415.m04466 1,4-alpha-glucan branching enzyme / sta...    31   1.4  
At5g10160.1 68418.m01176 beta-hydroxyacyl-ACP dehydratase, putat...    28   7.4  

>At2g36390.1 68415.m04466 1,4-alpha-glucan branching enzyme / starch
           branching enzyme class II (SBE2-1) nearly identical to
           starch branching enzyme class II [Arabidopsis thaliana]
           GI:619939
          Length = 858

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -1

Query: 255 MIFIHNFHWINAGGDFAIG-TVPAVF 181
           ++F+ NFHW N+  D+ IG +VP  +
Sbjct: 760 LLFVFNFHWTNSYSDYRIGCSVPGKY 785


>At5g10160.1 68418.m01176 beta-hydroxyacyl-ACP dehydratase, putative
           similar to beta-hydroxyacyl-ACP dehydratase from
           Toxoplasma gondii [GI:3850997]; contains Pfam profile
           PF01377 Thioester dehydratase
          Length = 219

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +1

Query: 94  FPVLXIX-IMXFTVAFALIAMFAXVAVNSQENGGDSPDGEVAPGVDPVKVVDEDHGVNIV 270
           FP L +  ++ +T   + +A+   V +N     G  P+  + PGV  V+ + +  G+ ++
Sbjct: 88  FPFLLVDRVIEYTAGVSAVAI-KNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGIVML 146

Query: 271 DGEPGG 288
             E GG
Sbjct: 147 QPEVGG 152


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,314,854
Number of Sequences: 28952
Number of extensions: 163989
Number of successful extensions: 349
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2139598560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)