BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_K15
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting pr... 32 2.4
BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein pr... 32 2.4
AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrom... 32 2.4
AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protei... 32 2.4
AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein. 32 2.4
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 31 7.4
>X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting
protein protein.
Length = 494
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = -3
Query: 460 SRRPP*XVXXPPGPKTXXP*AXPVSLPRSSLKXXXX*PAXPKXPXXXXPKXPKTXPPPXC 281
S RPP V PPG P PVS S+ + PA P+ P P++ P P
Sbjct: 363 SERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRAL---PATPQLPSRSGVDSPRSGPRPPL 419
Query: 280 XXQVTSRG 257
S G
Sbjct: 420 PPDRPSAG 427
>BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein
protein.
Length = 510
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = -3
Query: 460 SRRPP*XVXXPPGPKTXXP*AXPVSLPRSSLKXXXX*PAXPKXPXXXXPKXPKTXPPPXC 281
S RPP V PPG P PVS S+ + PA P+ P P++ P P
Sbjct: 362 SERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRAL---PATPQLPSRSGVDSPRSGPRPPL 418
Query: 280 XXQVTSRG 257
S G
Sbjct: 419 PPDRPSAG 426
>AF106062-1|AAD45972.1| 312|Homo sapiens Wiskott-Aldrich syndrome
protein interacting protein protein.
Length = 312
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = -3
Query: 460 SRRPP*XVXXPPGPKTXXP*AXPVSLPRSSLKXXXX*PAXPKXPXXXXPKXPKTXPPPXC 281
S RPP V PPG P PVS S+ + PA P+ P P++ P P
Sbjct: 171 SERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRAL---PATPQLPSRSGVDSPRSGPRPPL 227
Query: 280 XXQVTSRG 257
S G
Sbjct: 228 PPDRPSAG 235
>AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protein
protein.
Length = 503
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = -3
Query: 460 SRRPP*XVXXPPGPKTXXP*AXPVSLPRSSLKXXXX*PAXPKXPXXXXPKXPKTXPPPXC 281
S RPP V PPG P PVS S+ + PA P+ P P++ P P
Sbjct: 362 SERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRAL---PATPQLPSRSGVDSPRSGPRPPL 418
Query: 280 XXQVTSRG 257
S G
Sbjct: 419 PPDRPSAG 426
>AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein.
Length = 503
Score = 32.3 bits (70), Expect = 2.4
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = -3
Query: 460 SRRPP*XVXXPPGPKTXXP*AXPVSLPRSSLKXXXX*PAXPKXPXXXXPKXPKTXPPPXC 281
S RPP V PPG P PVS S+ + PA P+ P P++ P P
Sbjct: 362 SERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRAL---PATPQLPSRSGVDSPRSGPRPPL 418
Query: 280 XXQVTSRG 257
S G
Sbjct: 419 PPDRPSAG 426
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 30.7 bits (66), Expect = 7.4
Identities = 24/87 (27%), Positives = 29/87 (33%), Gaps = 2/87 (2%)
Frame = -3
Query: 544 PEPDAXI--PXXPPXCLFRSIVAXAFXFAQSRRPP*XVXXPPGPKTXXP*AXPVSLPRSS 371
P P A + P PP S+ A F + PP PP P P P P +S
Sbjct: 36 PGPGAGLLAPGPPPPPPVGSMGALTAAFPFAALPPPPPPPPPPPPQQPPPPPPPPSPGAS 95
Query: 370 LKXXXX*PAXPKXPXXXXPKXPKTXPP 290
P P P+ P PP
Sbjct: 96 YPPPQPPPPPPLYQRVSPPQPPPPQPP 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,154,837
Number of Sequences: 237096
Number of extensions: 1078372
Number of successful extensions: 2548
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2398
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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