Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_K15
         (891 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t...    31   1.0  
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro...    29   3.1  
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex...    29   5.5  
At1g26150.1 68414.m03192 protein kinase family protein similar t...    29   5.5  
At5g23150.1 68418.m02707 PWWP domain-containing protein identica...    28   7.2  

>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein similar to
           hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
           carteri f. nagariensis GP|6523547; contains Pfam profile
           PF00234 Protease inhibitor/seed storage/LTP family
          Length = 375

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 27/108 (25%), Positives = 38/108 (35%), Gaps = 1/108 (0%)
 Frame = -3

Query: 607 PNXFETXPPA-EKWXXXSRSHTPEPDAXIPXXPPXCLFRSIVAXAFXFAQSRRPP*XVXX 431
           P  F+  PPA ++     +S +P P A  P   P    + +         +  PP  +  
Sbjct: 56  PPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPP---KPLPPPLSPPQTTPPPPPAITP 112

Query: 430 PPGPKTXXP*AXPVSLPRSSLKXXXX*PAXPKXPXXXXPKXPKTXPPP 287
           PP P    P + P              PA P  P       P+T PPP
Sbjct: 113 PPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLPPPLSPPQTTPPP 160


>At5g58160.1 68418.m07280 formin homology 2 domain-containing
           protein / FH2 domain-containing protein low similarity
           to SP|Q05858 Formin (Limb deformity protein) {Gallus
           gallus}; contains Pfam profile PF02181: Formin Homology
           2(FH2) Domain
          Length = 1307

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = -3

Query: 451 PP*XVXXPPGPKTXXP*AXPVSLPRSSLKXXXX*PAXPKXPXXXXPKXPKTXPPP 287
           PP     PP P    P +  +S  +SS       PA P+ P       P T PPP
Sbjct: 727 PPPPPPPPPPPAPPTPQSNGISAMKSSPPAP---PAPPRLPTHSASPPPPTAPPP 778


>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
           extensin family protein contains similarity to disease
           resistance protein GI:3894383 from [Lycopersicon
           esculentum]; contains leucine-rich repeats,
           Pfam:PF00560; contains proline rich extensin domains,
           INTERPRO:IPR002965
          Length = 847

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 26/100 (26%), Positives = 32/100 (32%)
 Frame = -3

Query: 586 PPAEKWXXXSRSHTPEPDAXIPXXPPXCLFRSIVAXAFXFAQSRRPP*XVXXPPGPKTXX 407
           PP+  +      H+P P       PP  ++      A     S  PP  V  PP P    
Sbjct: 545 PPSPIYSPPPPVHSPPPPVYSSPPPPH-VYSPPPPVASPPPPSPPPP--VHSPPPPPVFS 601

Query: 406 P*AXPVSLPRSSLKXXXX*PAXPKXPXXXXPKXPKTXPPP 287
           P     S P  S       P+    P    P  P   PPP
Sbjct: 602 PPPPVFSPPPPSPVYSPPPPSHSPPPPVYSPPPPTFSPPP 641


>At1g26150.1 68414.m03192 protein kinase family protein similar to
           Pto kinase interactor 1 GI:3668069 from [Lycopersicon
           esculentum]
          Length = 760

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 20/75 (26%), Positives = 23/75 (30%)
 Frame = -3

Query: 451 PP*XVXXPPGPKTXXP*AXPVSLPRSSLKXXXX*PAXPKXPXXXXPKXPKTXPPPXCXXQ 272
           PP     PP P T  P   P++ P           + P  P    P  P   PPP     
Sbjct: 118 PPPESSPPPPPPTEAPPTTPITSPSPPTNPPPPPESPPSLPAPDPPSNP--LPPPKLVPP 175

Query: 271 VTSRGXRLEGXPXIE 227
             S    L   P  E
Sbjct: 176 SHSPPRHLPSPPASE 190



 Score = 27.9 bits (59), Expect = 9.6
 Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
 Frame = -3

Query: 451 PP*XVXXPPGPKTXXP*AXPVSL--PRSSLKXXXX*PAXPKXPXXXXPKXPKTXPPP 287
           PP     PP P    P A PVS   P SS        A P  P    P  P   PPP
Sbjct: 95  PPEPSPPPPLPTEAPPPANPVSSPPPESSPPPPPPTEAPPTTP-ITSPSPPTNPPPP 150


>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
            cDNA putative transcription factor (HUA2) GI:4868119;
            contains Pfam profile  PF00855:  PWWP domain
          Length = 1392

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
 Frame = -3

Query: 451  PP*XVXXPPGPKTXXP*AXPVSLP----RSSLKXXXX*PAXPKXPXXXXPKXPKTXPPP 287
            PP     PP P    P   P SLP     +        P+ P  P    P  P   PPP
Sbjct: 1069 PPPLPPLPPSPPPPSPPLPPSSLPPPPPAALFPPLPPPPSQPPPPPLSPPPSPPPPPPP 1127


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,760,252
Number of Sequences: 28952
Number of extensions: 147359
Number of successful extensions: 511
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2090971320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)