Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_K11
         (877 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.34 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   4.2  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   7.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   7.3  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +2

Query: 38  LKILQFAQYSVVPRRLVSYYNVNKTFNICCQFLCCS 145
           L  L F  Y++  RR+  +Y V+ TFN+   FL CS
Sbjct: 43  LDSLVFKCYNL--RRIYYFYCVSITFNVHLLFLLCS 76


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +3

Query: 522 YSPLTDKHFIYIWILSRNPILNDVSKELATKPLSQ--LGXDVTKIKKDD 662
           ++PLTD   I++WI    P+L D   +    P+ Q  LG  +T     D
Sbjct: 532 WNPLTDTIPIHVWIHPWIPLL-DTRLQAIIYPIIQEKLGVALTNWHPSD 579


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 462 YPFSVLATNYQYYATVYTCQY 524
           Y ++   +NY  Y   ++CQY
Sbjct: 215 YQYNQAYSNYNNYQEGFSCQY 235


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 462 YPFSVLATNYQYYATVYTCQY 524
           Y ++   +NY  Y   ++CQY
Sbjct: 235 YQYNQAYSNYNNYQEGFSCQY 255


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = -1

Query: 472 ENGYLLILSLLGAFSKKNLTFNLAASSKFDGISNL 368
           +NG +L  ++  A    ++++++ A SK+  I N+
Sbjct: 170 KNGLILTAAVAAASGSVDISYDVPALSKYLDIINV 204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,701
Number of Sequences: 336
Number of extensions: 3563
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)