Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_K11
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0805 + 21400345-21400701,21400797-21400975,21401223-214012...    34   0.17 
12_02_1155 + 26541137-26541142,26541244-26542623,26542730-265428...    30   2.8  
04_04_1227 - 31882500-31882778,31883039-31883329,31883555-318838...    29   4.9  

>08_02_0805 +
           21400345-21400701,21400797-21400975,21401223-21401271,
           21401310-21401390,21401988-21402605
          Length = 427

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 3/153 (1%)
 Frame = +3

Query: 207 LADFFGKWYQAYHYSSDEQQQ---NNCSVLELQTKPSGIYLNQSRIDRGLFHRYSIAKLE 377
           L  + G+WY+   + S  Q +   N  +   L    +   LN++  D    H    A   
Sbjct: 9   LERYMGRWYEIACFPSRFQPRDGTNTRATYTLAGDGAVKVLNETWTDGRRGHIEGTAYRA 68

Query: 378 IPSNLEDAAKLNVKFFFENAPRRLRIRRYPFSVLATNYQYYATVYTCQYSPLTDKHFIYI 557
            P  + D AKL VKF+    P  L I    F V+  +Y          Y+ +      Y+
Sbjct: 69  DP--VSDEAKLKVKFY---VPPFLPI----FPVVG-DYWVLHVDDAYSYALVGQPSLNYL 118

Query: 558 WILSRNPILNDVSKELATKPLSQLGXDVTKIKK 656
           WIL R P +++       +   + G DV+K+KK
Sbjct: 119 WILCRQPHMDEEVYGQLVERAKEEGYDVSKLKK 151


>12_02_1155 + 26541137-26541142,26541244-26542623,26542730-26542852,
            26542996-26543168,26543332-26543572,26543931-26544023,
            26544092-26544232,26544358-26544450,26544633-26544837,
            26544993-26545078,26545532-26545620,26545736-26545820,
            26545898-26545954,26546319-26546399,26547130-26547321
          Length = 1014

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 177  ADVQLQQEFRLADFFGKWYQAYHYSSDEQQQ 269
            AD+ L+ EFR+  +F   YQ++ Y+  +Q Q
Sbjct: 968  ADLTLKDEFRIGKYFTANYQSFTYTIHDQPQ 998


>04_04_1227 -
           31882500-31882778,31883039-31883329,31883555-31883800,
           31884212-31884353,31884583-31884653
          Length = 342

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 23/67 (34%), Positives = 32/67 (47%)
 Frame = +3

Query: 453 IRRYPFSVLATNYQYYATVYTCQYSPLTDKHFIYIWILSRNPILNDVSKELATKPLSQLG 632
           I + P+ VLAT+Y  YA V     S   D  FI I+  + NP    + K  +    +  G
Sbjct: 222 IPKEPYDVLATDYDNYAVV-----SGAKDTSFIQIYSRTPNPGPEFIEKYKSY--AANFG 274

Query: 633 XDVTKIK 653
            D +KIK
Sbjct: 275 YDPSKIK 281


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,614,589
Number of Sequences: 37544
Number of extensions: 350234
Number of successful extensions: 715
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)