Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_K11
         (877 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    26   1.7  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   4.0  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
 Frame = +3

Query: 141  VHAYFTLPGKCPADVQLQQEFRLADFFGKWYQAY-HYSSDEQQQNNCSVLELQTKPSGIY 317
            +  +F L  K        QE++ +D++ K+Y+ Y H   D   Q N +  + Q      +
Sbjct: 944  METFFDLLDKQYDSYNKHQEYKSSDYYYKYYKQYPHLFKDYFSQYNKN-HKYQNDYYEQF 1002

Query: 318  LNQSRIDRGLFHRYSIAKLEIPSNLEDAAKLNVKFFFE 431
             N+++ +   +    IAKL +  + E+A +L  +F F+
Sbjct: 1003 GNKNQEEFQKWSTTRIAKL-LNIDPEEAEELEGQFMFQ 1039


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +3

Query: 201  FRLADFFGKWYQAYHYSSDEQQQNNCSVLELQTKPSGIYLNQSRI 335
            F +  F  +  Q Y     ++ Q NC    L+ KP   Y+ + RI
Sbjct: 1120 FVIVTFQNEGEQEYKNCDLDKNQRNCIEFALKAKPIRRYIPKHRI 1164


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,339
Number of Sequences: 2352
Number of extensions: 15788
Number of successful extensions: 33
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)