Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_K10
         (898 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    64   1e-12
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    57   2e-10
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.7  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 64.1 bits (149), Expect = 1e-12
 Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 1/178 (0%)
 Frame = +2

Query: 356 LPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACWMRERINGGMFVYAFTAACFH 535
           L R E F        + A K+ R+   A+  D  +  A + R+R+N  +F YAF+ A  H
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 536 RTDCKGLYLPAPYEIYPYFFVDSHVISXXXXXXXXXXXXDPVLWKYYGITVTDDNLVVID 715
           R D + L LP+   ++P  +VDS V +                 +     V + +   I+
Sbjct: 134 RPDTQNLDLPSFIHVFPDKYVDSQVFARA---------------REEAHIVPEGSRTPIE 178

Query: 716 WRKGVRRS-LSQNDVMSYFMEDVDLNTYMYYLHMNYPFWMTDDAYGITKERRGEIMMY 886
             +    S L +   ++Y+ ED+ LN + ++ H+ YPF    +   + K RRGEI  Y
Sbjct: 179 IPQDFTASDLDEEHRVAYWREDIGLNLHHWHWHLVYPFEGAREI--VDKNRRGEIFYY 234


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 56.8 bits (131), Expect = 2e-10
 Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
 Frame = +2

Query: 440 KDFDVFMRTACWMRERINGGMFVYAFTAACFHRTDCKGLYLPAPYEIYPYFFVDSHVISX 619
           ++ D  +  A + R+R+N  +F YA + A  HR D + + LP+  E +P  +VDS V + 
Sbjct: 102 RNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFPDKYVDSKVFAK 161

Query: 620 XXXXXXXXXXXDPVLWKYYGITVTDDNLVVIDWRKGVRRS-LSQNDVMSYFMEDVDLNTY 796
                           +     V + +   I+  +    S L +   ++YF ED+ +N +
Sbjct: 162 A---------------REEATVVPEGSRTPIEIPRDYTASDLEEEHRLAYFREDLGINLH 206

Query: 797 MYYLHMNYPFWMTDDAYGITKERRGEIMMY 886
            ++ H+ YPF    +   + K RRGE+  Y
Sbjct: 207 HWHWHLVYPFEAAREV--VAKNRRGELFYY 234



 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 667 PEDRVLGGFSHLHHKGFTDDMAVNEE 590
           P   V   F+HL H+ FT  + VN +
Sbjct: 466 PRGSVFVRFTHLQHQPFTYKITVNNQ 491



 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +2

Query: 275 YNIEKSCDKYMNVDVVKQFMEMYKMGMLPRGETFV 379
           YN E+ C+K         F E  K    P+ ++ V
Sbjct: 243 YNFERLCNKLKRATRFNDFNEAIKEAYFPKLDSLV 277


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 508 DEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 401
           D   ++ P + P R P +N + L  +E S +  G F
Sbjct: 125 DMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLF 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,794
Number of Sequences: 336
Number of extensions: 3457
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)