Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_K09
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1534 + 34200538-34200589,34200677-34200857,34201701-342018...    28   8.9  

>04_04_1534 +
           34200538-34200589,34200677-34200857,34201701-34201842,
           34201963-34202032,34202169-34202302
          Length = 192

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 469 LKFGVLLWCLTYVGACFNGITLIIL 543
           +K  ++LW ++Y+G  FN +TLI +
Sbjct: 124 IKVILILWVVSYIGMLFNFLTLIYI 148


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,927,468
Number of Sequences: 37544
Number of extensions: 134327
Number of successful extensions: 603
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)