Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_K08
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0022 + 324422-324445,324870-325265,325366-325546,325781-32...    30   2.2  
06_02_0243 - 13433276-13434154,13434192-13434593,13434730-13434750     29   3.8  

>04_01_0022 +
           324422-324445,324870-325265,325366-325546,325781-326072,
           326389-326461,326610-326700,326815-326894,326992-327234
          Length = 459

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 23  LLLVAFLXYFCFXRSLSLAXSXRXAXVXSFRFGCPLRWF 139
           L++V+ L YFCF   L +A     A   S  F C L  F
Sbjct: 306 LVIVSILAYFCFLEQLLVARDGIAALAISLPFSCILGLF 344


>06_02_0243 - 13433276-13434154,13434192-13434593,13434730-13434750
          Length = 433

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 23  LLLVAFLXYFCFXRSLSLAXSXRXAXVXSFRFGCPLRWF 139
           L++V+ L YFCF   L +      A   S  F C L  F
Sbjct: 375 LVIVSMLAYFCFLEQLLVGDHGTAALAISLPFACVLGLF 413


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,941,056
Number of Sequences: 37544
Number of extensions: 207623
Number of successful extensions: 404
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)