Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_K07
         (865 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    43   3e-06
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    34   0.001
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.4  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 43.2 bits (97), Expect = 3e-06
 Identities = 27/89 (30%), Positives = 40/89 (44%)
 Frame = +2

Query: 362 LPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACWMRXRXXGGXFVYAFTAACFH 541
           L R E F        + A K+ R+   A+  D  +  A + R R     F YAF+ A  H
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 542 RXDCKGLYLXAPYEIYPYFFVDXHVXXKA 628
           R D + L L +   ++P  +VD  V  +A
Sbjct: 134 RPDTQNLDLPSFIHVFPDKYVDSQVFARA 162


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 34.3 bits (75), Expect = 0.001
 Identities = 23/80 (28%), Positives = 34/80 (42%)
 Frame = +2

Query: 446 KDFDVFMRTACWMRXRXXGGXFVYAFTAACFHRXDCKGLYLXAPYEIYPYFFVDXHVXXK 625
           ++ D  +  A + R R     F YA + A  HR D + + L +  E +P  +VD  V  K
Sbjct: 102 RNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFPDKYVDSKVFAK 161

Query: 626 AFMXEXDXSRQGPGPLEILR 685
           A             P+EI R
Sbjct: 162 AREEATVVPEGSRTPIEIPR 181


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 514 DEXASVXPXSHPARSPHENIEVLSVVEDSEDFDGFF 407
           D   ++ P + P R P +N + L  +E S +  G F
Sbjct: 125 DMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLF 160


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
 Frame = +2

Query: 398 LQMEEAVKVFRVLYYAKDFDVFMRTACWMRXRXXGGXFVYAFTAACFHR-XDCKGLYL 568
           L  EE +KVF  L    D+ V      W+        F + +    F R  D  G Y+
Sbjct: 385 LSWEEGMKVFEELLLDADWSVNAGMWMWLSCSSFFQQFFHCYCPIKFGRKADPNGDYI 442


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,088
Number of Sequences: 336
Number of extensions: 1413
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)