Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_K06
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474...    32   0.68 
01_06_1477 + 37645143-37647425                                         29   3.6  
02_03_0099 + 15206282-15206917                                         29   6.4  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.4  
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892...    28   8.4  

>09_04_0424 +
           17444261-17444665,17445974-17446367,17447367-17447425,
           17447507-17447637,17447737-17447833,17447936-17448100
          Length = 416

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 23/79 (29%), Positives = 29/79 (36%)
 Frame = +1

Query: 619 AFPPGSSLVRSPVPTLXLTGYCPPFSLXEAWRFLIAHAVGISVRCRSFXPSWAVCTNPPF 798
           A PP       P P      + PP +     +  +A A         F P  AV   PP 
Sbjct: 22  AAPPPPQAALPPPPHWVAMPFAPPGAAAMVMQHQMAPAP--PQFAPHFVPFHAVGPPPPP 79

Query: 799 SPXAAPYPVTIVLSPPGRH 855
            P AAP PV + +  P  H
Sbjct: 80  QPRAAPPPVAVAMGSPAPH 98


>01_06_1477 + 37645143-37647425
          Length = 760

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
 Frame = +1

Query: 541 RPPXRASQKSTLKSEVAKPDGL*RYQAFPPGSSLVRSPVPTLXLTG-YCPPFSLXEAWRF 717
           +P   A+  S+    V+ P  L +     PGS ++ S   ++ + G    PF++      
Sbjct: 473 KPAPEAAAYSSRGPAVSCPTVL-KPDIMAPGSLVLASWAESVAVVGNMTSPFNIISGTSM 531

Query: 718 LIAHAVGISVRCRSFXPSWA 777
              HA G++   R+  P W+
Sbjct: 532 ATPHAAGVAALLRAVHPEWS 551


>02_03_0099 + 15206282-15206917
          Length = 211

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 533 IGSAPLXEHHKNRRSSQRWRNPTDY 607
           +G  P  ++H++RRS+ RW    D+
Sbjct: 176 VGKGPSLQNHRDRRSTSRWIRHVDH 200


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 298 NESAN---ARGEAVCVLGALPLPRSLTRCAR 381
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>01_06_0565 +
           30287253-30287502,30287522-30289010,30289133-30289277,
           30289679-30289729
          Length = 644

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
 Frame = +1

Query: 622 FPPGSSLVRSPVPTLXLTGYCPPFSLXEAWRFLIAHAVGISVRCRSFXPSWAV---CTNP 792
           +PP  S+  SP       GY PP        +     V IS     + P        T P
Sbjct: 510 YPPTPSIGTSPSTPGTGGGYYPPSP--STGGYTPTPDVPISTPSSPYSPLVPTPPSSTTP 567

Query: 793 -PFSPXAAPYPVTIVLSPPG 849
            PF P  AP+P +  LS PG
Sbjct: 568 MPFDPNTAPFPCSYWLSHPG 587


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,192,188
Number of Sequences: 37544
Number of extensions: 499197
Number of successful extensions: 1402
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)