Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_K03
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0110 + 815510-816064                                             31   1.7  
03_05_0468 - 24630701-24631399                                         31   1.7  
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443     30   2.9  
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530...    29   5.1  
10_08_0705 + 20032111-20032437,20032525-20032896                       28   8.8  
09_04_0448 + 17692650-17692970,17693461-17693811                       28   8.8  
04_04_0365 + 24731536-24731732,24731977-24732118                       28   8.8  

>08_01_0110 + 815510-816064
          Length = 184

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
 Frame = -3

Query: 234 EVRPVSREHAVVFEVLAS---VGEQHTAALPESLASEVMVHNLRHFQFVVVSR--RALGX 70
           + R V + H  +  VLA     GE+H   +  +   +V   N  HF   VV R  R  G 
Sbjct: 21  DARDVHQRHGCIVNVLAVHPITGERHEVTVDSTSDGDVSAPNEDHFTARVVRRYLRLKGR 80

Query: 69  IAEAKTQKLKE 37
           + E   Q L E
Sbjct: 81  LGEVTLQMLSE 91


>03_05_0468 - 24630701-24631399
          Length = 232

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 221 TGLTSSQRPRFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAG 346
           + L  S  P  GQ+PVL++ GK   +S  I  ++  ++   G
Sbjct: 44  SALLLSSNPVHGQVPVLLVGGKPVCESLVILEFIDEEFAGVG 85


>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
          Length = 221

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 251 FGQMPVLVIDGKQYAQSTAICRYLGRKYGLAGAN 352
           FGQ+PVL    +   +S AI RY+  KY   GA+
Sbjct: 56  FGQIPVLQDGDEVLYESRAINRYIATKYKAEGAD 89


>01_04_0021 -
           15151645-15151809,15152184-15152343,15152548-15153025,
           15153243-15153291,15153585-15153734
          Length = 333

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +2

Query: 242 RPRFGQMPVLVIDGKQYAQSTAICRYLGRKY 334
           R  FG++PVL        QS AI RY+ RKY
Sbjct: 49  RNPFGEIPVLEDGDLTLYQSRAIARYIFRKY 79


>10_08_0705 + 20032111-20032437,20032525-20032896
          Length = 232

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 227 LTSSQRPRFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAGA 349
           L  S  P   ++PVL+ +GK   +S  I +YL   +  AGA
Sbjct: 46  LLLSSNPVNKKVPVLIHNGKPVCESQVILQYLDEAFPGAGA 86


>09_04_0448 + 17692650-17692970,17693461-17693811
          Length = 223

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 257 QMPVLVIDGKQYAQSTAICRYL 322
           ++PVLV DGK  A+ST I  Y+
Sbjct: 55  KVPVLVHDGKPLAESTVIVEYI 76


>04_04_0365 + 24731536-24731732,24731977-24732118
          Length = 112

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 158 AAVCCSPTEARTSKTTACSLLTGLTSSQR 244
           AA+CCSP   R + T  C ++    +S +
Sbjct: 17  AALCCSPGSRRAASTAVCRIVDDRATSSK 45


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,714,814
Number of Sequences: 37544
Number of extensions: 315792
Number of successful extensions: 950
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)