Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_K03
         (902 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g28910.2 68417.m04132 expressed protein                             31   1.0  
At4g28910.1 68417.m04131 expressed protein                             31   1.0  
At2g30870.1 68415.m03762 glutathione S-transferase, putative sup...    30   1.8  
At1g62300.1 68414.m07028 WRKY family transcription factor simila...    28   7.4  
At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative / ...    28   9.7  
At1g12970.1 68414.m01506 leucine-rich repeat family protein            28   9.7  

>At4g28910.2 68417.m04132 expressed protein
          Length = 425

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = +2

Query: 326 RKYGLAGANDEEAFEIDQNVEFLHDIRAKAAAVYYEADEELKAKKHEDFSKN 481
           RK+G  G ND++  E D +   +H+ + KA+ V    DE   A ++ED +++
Sbjct: 116 RKFGFPGMNDDKKKEKDSSHVDMHEKKTKASHVSTATDEGSTA-ENEDVAES 166


>At4g28910.1 68417.m04131 expressed protein
          Length = 425

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = +2

Query: 326 RKYGLAGANDEEAFEIDQNVEFLHDIRAKAAAVYYEADEELKAKKHEDFSKN 481
           RK+G  G ND++  E D +   +H+ + KA+ V    DE   A ++ED +++
Sbjct: 116 RKFGFPGMNDDKKKEKDSSHVDMHEKKTKASHVSTATDEGSTA-ENEDVAES 166


>At2g30870.1 68415.m03762 glutathione S-transferase, putative
           supported by cDNA GI:443698 GB:D17673
          Length = 215

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
 Frame = +2

Query: 251 FGQMPVLVIDGKQYAQSTAICRYLGRKY-----GLAGANDEEAFEIDQ 379
           FG++PVLV    +  +S AI RY+  KY      L G   EE  +++Q
Sbjct: 50  FGKIPVLVDGDYKIFESRAIMRYIAEKYRSQGPDLLGKTIEERGQVEQ 97


>At1g62300.1 68414.m07028 WRKY family transcription factor similar
           to putative DNA-binding protein GI:7268215 from
           [Arabidopsis thaliana]
          Length = 553

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = +2

Query: 446 LKAKKHEDFSKNVYPXYVEEV--ELDS*SEQRSHCCRKADMG*FRV 577
           ++ ++ EDFS  V      EV  E+D  S+++S  CR+ D G FRV
Sbjct: 66  IRDREDEDFSSGVAGDNDREVPGEVDFFSDKKSRVCREDDEG-FRV 110


>At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative /
           eEF-1B gamma, putative similar to elongation factor 1B
           gamma GI:3868758 from [Oryza sativa]
          Length = 413

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +2

Query: 254 GQMPVLVIDGKQYAQSTAICRYLGRKYG---LAGANDEEAFEIDQNVEF 391
           G++PVL        +S AI RY+ RK G   L G++  E   I+Q ++F
Sbjct: 52  GKVPVLETPEGPIFESNAIARYVSRKNGDNSLNGSSLIEYAHIEQWIDF 100


>At1g12970.1 68414.m01506 leucine-rich repeat family protein
          Length = 464

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +3

Query: 501 KKLNSIVEANKGHIAA-GKLTWGDFVFTSMF 590
           ++L S++EA K    A G L+WG  + TS+F
Sbjct: 413 EQLRSVIEAEKQQGGATGWLSWGSSIVTSLF 443


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,334,192
Number of Sequences: 28952
Number of extensions: 256818
Number of successful extensions: 653
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2129873112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)