Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_J22
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 39 0.006
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.039
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.039
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.039
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.052
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.052
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.052
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.84
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 0.84
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 31 0.84
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 0.84
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 0.84
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.5
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 31 1.5
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.5
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 30 1.9
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 1.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 1.9
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 1.9
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 1.9
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 30 2.6
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.6
AL021173-1|CAE17951.1| 89|Caenorhabditis elegans Hypothetical ... 30 2.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.6
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 3.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.5
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 4.5
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 5.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.9
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 28 7.8
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 7.8
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 28 7.8
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 38.7 bits (86), Expect = 0.006
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -2
Query: 454 GGXPXPPPXXGXXPPPPPXKXXXPXXXPP 368
GG P PPP G PPPPP P PP
Sbjct: 92 GGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Score = 37.1 bits (82), Expect = 0.017
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -2
Query: 526 GXGKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPPXKXXXPXXXPP 368
G G PP P GG P PPP G PPPPP PP
Sbjct: 79 GPGGIPPPPPMFAGGIPPPP-PMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 451 GXPXPPPXXGXXPPPPPXKXXXPXXXPP 368
G PPP G PPPPP PP
Sbjct: 72 GFIPPPPGPGGIPPPPPMFAGGIPPPPP 99
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.9 bits (79), Expect = 0.039
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 6/36 (16%)
Frame = -2
Query: 454 GGXPXPPPXXGXXPPPPP------XKXXXPXXXPPG 365
GG P PPP G PPPPP K P PPG
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -2
Query: 529 GGXGKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPPXKXXXPXXXPPGXSXNF 350
GG PP G GG P P G PPPPP P PP F
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLP---PISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Score = 31.5 bits (68), Expect = 0.84
Identities = 24/86 (27%), Positives = 24/86 (27%), Gaps = 3/86 (3%)
Frame = -2
Query: 520 GKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPPXKXXXP---XXXPPGXSXNF 350
G PP P G GG PP G PPPPP P PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGL---PPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 349 XXXXXXXPXXXXXKXGPXKXXPXXXF 272
P K GP P F
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/94 (26%), Positives = 25/94 (26%), Gaps = 6/94 (6%)
Frame = +1
Query: 268 PXXXXGGXFFXXPXFXXXPXXXXXPXXXNXGXPPGXXXGGXXFXXGGG------GXFXXX 429
P GG P P P G PP GG GG G
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITG-GPPPPPPPGGLPPITGGPPPPPPPGGLPPI 754
Query: 430 XGGXXXXPPXXPXXXPPXXXXPXXXLXXXXPPPP 531
GG PP PP P PPPP
Sbjct: 755 SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = -2
Query: 454 GGXPXPPPXXGXXPPP---PPXKXXXPXXXPPG 365
GG PP G PPP PP P PPG
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPG 733
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.9 bits (79), Expect = 0.039
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 6/36 (16%)
Frame = -2
Query: 454 GGXPXPPPXXGXXPPPPP------XKXXXPXXXPPG 365
GG P PPP G PPPPP K P PPG
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -2
Query: 529 GGXGKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPPXKXXXPXXXPPGXSXNF 350
GG PP G GG P P G PPPPP P PP F
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLP---PISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Score = 31.5 bits (68), Expect = 0.84
Identities = 24/86 (27%), Positives = 24/86 (27%), Gaps = 3/86 (3%)
Frame = -2
Query: 520 GKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPPXKXXXP---XXXPPGXSXNF 350
G PP P G GG PP G PPPPP P PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGL---PPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 349 XXXXXXXPXXXXXKXGPXKXXPXXXF 272
P K GP P F
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/94 (26%), Positives = 25/94 (26%), Gaps = 6/94 (6%)
Frame = +1
Query: 268 PXXXXGGXFFXXPXFXXXPXXXXXPXXXNXGXPPGXXXGGXXFXXGGG------GXFXXX 429
P GG P P P G PP GG GG G
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITG-GPPPPPPPGGLPPITGGPPPPPPPGGLPPI 754
Query: 430 XGGXXXXPPXXPXXXPPXXXXPXXXLXXXXPPPP 531
GG PP PP P PPPP
Sbjct: 755 SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = -2
Query: 454 GGXPXPPPXXGXXPPP---PPXKXXXPXXXPPG 365
GG PP G PPP PP P PPG
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPG 733
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.9 bits (79), Expect = 0.039
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 6/36 (16%)
Frame = -2
Query: 454 GGXPXPPPXXGXXPPPPP------XKXXXPXXXPPG 365
GG P PPP G PPPPP K P PPG
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -2
Query: 529 GGXGKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPPXKXXXPXXXPPGXSXNF 350
GG PP G GG P P G PPPPP P PP F
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLP---PISGGPPPPPPPPGGCPPPPPPPPPGGF 363
Score = 31.5 bits (68), Expect = 0.84
Identities = 24/86 (27%), Positives = 24/86 (27%), Gaps = 3/86 (3%)
Frame = -2
Query: 520 GKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPPXKXXXP---XXXPPGXSXNF 350
G PP P G GG PP G PPPPP P PP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGL---PPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 349 XXXXXXXPXXXXXKXGPXKXXPXXXF 272
P K GP P F
Sbjct: 351 CPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/94 (26%), Positives = 25/94 (26%), Gaps = 6/94 (6%)
Frame = +1
Query: 268 PXXXXGGXFFXXPXFXXXPXXXXXPXXXNXGXPPGXXXGGXXFXXGGG------GXFXXX 429
P GG P P P G PP GG GG G
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITG-GPPPPPPPGGLPPITGGPPPPPPPGGLPPI 337
Query: 430 XGGXXXXPPXXPXXXPPXXXXPXXXLXXXXPPPP 531
GG PP PP P PPPP
Sbjct: 338 SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = -2
Query: 454 GGXPXPPPXXGXXPPP---PPXKXXXPXXXPPG 365
GG PP G PPP PP P PPG
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPG 316
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.5 bits (78), Expect = 0.052
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 438 PPPXXXKXPPPPRXKXXPPXXXPRGXP 358
PPP PPPPR PP PRG P
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRGSP 307
Score = 35.5 bits (78), Expect = 0.052
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -2
Query: 511 PPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPPXKXXXPXXXPPGXS 359
PP P G GG P PP G PPPP K P PP S
Sbjct: 299 PPPPPRGSPPTGSLPPPQAGGSP-PPAGTGSPPPPPRQKRQAPERSPPTGS 348
Score = 34.7 bits (76), Expect = 0.090
Identities = 27/84 (32%), Positives = 28/84 (33%), Gaps = 2/84 (2%)
Frame = -3
Query: 453 GGXXXPPPXXXKXPPPPRXKXXPPXXXPRGXPXIXXXXXXXXPGXXXKXGXPKKXXPXXX 274
G PPP PPPPR PP P G P P + G P P
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPP--PPTGSPPPPPAGGSPPP---PRAGSP--PPPPPP 303
Query: 273 XGXXPXG--XXKXXGGXPPPXXGG 208
G P G GG PPP G
Sbjct: 304 RGSPPTGSLPPPQAGGSPPPAGTG 327
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = -2
Query: 520 GKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPPXKXXXPXXXPP 368
G PP P G GG P PPP G PPPPP + P P
Sbjct: 270 GSPPPPPT------GSPPPPPAGGSP-PPPRAGSPPPPPPPRGSPPTGSLP 313
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = -1
Query: 437 PPXXXXKXPPPPXKXXXPPXKXPGGXPKFXXXGXXXXXGXXXKXGXXKKXPPXXFXGKXP 258
PP PPPP PP P G P G G PP + P
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 340
Query: 257 GGXXKXXGGPP 225
G PP
Sbjct: 341 -ERSPPTGSPP 350
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.052
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 438 PPPXXXKXPPPPRXKXXPPXXXPRGXP 358
PPP PPPPR PP PRG P
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRGSP 328
Score = 35.5 bits (78), Expect = 0.052
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -2
Query: 511 PPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPPXKXXXPXXXPPGXS 359
PP P G GG P PP G PPPP K P PP S
Sbjct: 320 PPPPPRGSPPTGSLPPPQAGGSP-PPAGTGSPPPPPRQKRQAPERSPPTGS 369
Score = 34.7 bits (76), Expect = 0.090
Identities = 27/84 (32%), Positives = 28/84 (33%), Gaps = 2/84 (2%)
Frame = -3
Query: 453 GGXXXPPPXXXKXPPPPRXKXXPPXXXPRGXPXIXXXXXXXXPGXXXKXGXPKKXXPXXX 274
G PPP PPPPR PP P G P P + G P P
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPP--PPTGSPPPPPAGGSPPP---PRAGSP--PPPPPP 324
Query: 273 XGXXPXG--XXKXXGGXPPPXXGG 208
G P G GG PPP G
Sbjct: 325 RGSPPTGSLPPPQAGGSPPPAGTG 348
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = -2
Query: 520 GKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPPXKXXXPXXXPP 368
G PP P G GG P PPP G PPPPP + P P
Sbjct: 291 GSPPPPPT------GSPPPPPAGGSP-PPPRAGSPPPPPPPRGSPPTGSLP 334
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = -1
Query: 437 PPXXXXKXPPPPXKXXXPPXKXPGGXPKFXXXGXXXXXGXXXKXGXXKKXPPXXFXGKXP 258
PP PPPP PP P G P G G PP + P
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 361
Query: 257 GGXXKXXGGPP 225
G PP
Sbjct: 362 -ERSPPTGSPP 371
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.052
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 438 PPPXXXKXPPPPRXKXXPPXXXPRGXP 358
PPP PPPPR PP PRG P
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRGSP 313
Score = 35.5 bits (78), Expect = 0.052
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -2
Query: 511 PPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPPXKXXXPXXXPPGXS 359
PP P G GG P PP G PPPP K P PP S
Sbjct: 305 PPPPPRGSPPTGSLPPPQAGGSP-PPAGTGSPPPPPRQKRQAPERSPPTGS 354
Score = 34.7 bits (76), Expect = 0.090
Identities = 27/84 (32%), Positives = 28/84 (33%), Gaps = 2/84 (2%)
Frame = -3
Query: 453 GGXXXPPPXXXKXPPPPRXKXXPPXXXPRGXPXIXXXXXXXXPGXXXKXGXPKKXXPXXX 274
G PPP PPPPR PP P G P P + G P P
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPP--PPTGSPPPPPAGGSPPP---PRAGSP--PPPPPP 309
Query: 273 XGXXPXG--XXKXXGGXPPPXXGG 208
G P G GG PPP G
Sbjct: 310 RGSPPTGSLPPPQAGGSPPPAGTG 333
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = -2
Query: 520 GKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPPXKXXXPXXXPP 368
G PP P G GG P PPP G PPPPP + P P
Sbjct: 276 GSPPPPPT------GSPPPPPAGGSP-PPPRAGSPPPPPPPRGSPPTGSLP 319
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = -1
Query: 437 PPXXXXKXPPPPXKXXXPPXKXPGGXPKFXXXGXXXXXGXXXKXGXXKKXPPXXFXGKXP 258
PP PPPP PP P G P G G PP + P
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 346
Query: 257 GGXXKXXGGPP 225
G PP
Sbjct: 347 -ERSPPTGSPP 356
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -1
Query: 530 GGGGXXXXKXXXGXXXXGGKXXGXXGGXXXXPPXXXXKXPPPPXKXXXPPXKXPGG 363
GGGG G GG GG P PPPP P GG
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -1
Query: 530 GGGGXXXXKXXXGXXXXGGKXXGXXGGXXXXPPXXXXKXPPPPXKXXXPPXKXPGG 363
GGGG G GG GG P PPPP P GG
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = -2
Query: 526 GXGKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPP 401
G G PP P + GG P PPP PPPPP
Sbjct: 766 GVGVPPPPPPPSAIPLPPRL---QGGIPPPPPLGIIPPPPPP 804
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 445 PXPPPXXGXXPPPPPXKXXXPXXXPPG 365
P PP G PPPPP P PPG
Sbjct: 780 PLPPRLQGGIPPPPPL-GIIPPPPPPG 805
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -3
Query: 477 GXXXGXXGGGXXXPPPXXXKXPPPPRXKXXPPXXXPRG 364
G G G G PPP P PPR + P P G
Sbjct: 759 GMRGGPVGVGVPPPPPPPSAIPLPPRLQGGIPPPPPLG 796
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Frame = +3
Query: 369 GGFXXGXXXFXGGGGGF---XPXXGGGXGXPPXXXPXF 473
GGF G F GGGGGF P G P P F
Sbjct: 487 GGFGGGGGGFGGGGGGFGSGSPFGGAAPSPPSGPDPDF 524
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.84
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -2
Query: 526 GXGKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPP 404
G G PP P + G P PP G PPPP
Sbjct: 70 GTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPP 110
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -2
Query: 526 GXGKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPP 401
G G PP P + P PPP PPPPP
Sbjct: 133 GTGSPPPPPTGEPQDLSGEGNASR--RPPPPPKGTGSPPPPP 172
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -2
Query: 526 GXGKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPP 401
G G PP P + P PPP PPPPP
Sbjct: 164 GTGSPPPPPTGEPQDLSTEGNASR--RPPPPPKGTGTPPPPP 203
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -2
Query: 526 GXGKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPP 401
G G PP P + P PPP PPPPP
Sbjct: 39 GTGTPPPPPTGEPQDLSGEGNASR--RPPPPPKGTGTPPPPP 78
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -2
Query: 526 GXGKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPP 401
G G PP P + P PPP PPPPP
Sbjct: 102 GTGTPPPPPTGEPQDLSGEGNASR--RPPPPPKGTGSPPPPP 141
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = -2
Query: 526 GXGKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPP 401
G G PP P + GG P PPP PPPPP
Sbjct: 766 GVGVPPPPPPPSAIPLPPRL---QGGIPPPPPLGIIPPPPPP 804
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 445 PXPPPXXGXXPPPPPXKXXXPXXXPPG 365
P PP G PPPPP P PPG
Sbjct: 780 PLPPRLQGGIPPPPPL-GIIPPPPPPG 805
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -3
Query: 477 GXXXGXXGGGXXXPPPXXXKXPPPPRXKXXPPXXXPRG 364
G G G G PPP P PPR + P P G
Sbjct: 759 GMRGGPVGVGVPPPPPPPSAIPLPPRLQGGIPPPPPLG 796
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 529 GGXGKXPPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPPXKXXXPXXXPP 368
GG G PP G G G P PP G PPP P PP
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPP--TGFPPVGAPP 458
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +3
Query: 366 PGGFXXGXXXFXGGGGGFXPXXGGGXGXPPXXXPXFXPXXXXXXXGFGGXXPXPP 530
PG F F G P GG G PP P G GG P PP
Sbjct: 387 PGAFAPPPSAFGAPQG---PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPP 438
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/61 (27%), Positives = 19/61 (31%), Gaps = 4/61 (6%)
Frame = -2
Query: 454 GGXPXPPPXXGXXPPPPPXKXXXP----XXXPPGXSXNFXXXXXXXPXXXXXKXGPXKXX 287
G P PP G PPPPP + P PP + P GP
Sbjct: 305 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP 364
Query: 286 P 284
P
Sbjct: 365 P 365
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 445 PXPPPXXGXXPPPPPXKXXXPXXXPPG 365
P PPP G PPPPP PPG
Sbjct: 287 PPPPPSSGMWPPPPPPPPGR-TPGPPG 312
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 511 PPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPP 401
PP P G P PP G PPPPP
Sbjct: 350 PPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/76 (26%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Frame = -2
Query: 445 PXPPPXXGXXPPP-PPXKXXXPXXXPPGXSXNFXXXXXXXPXXXXXKXGPXKXXPXXXFX 269
P PPP PPP PP P PP S + P G P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
Query: 268 XXXXGGXXKXXGXPPP 221
G PPP
Sbjct: 324 RFGPPGMGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/61 (27%), Positives = 19/61 (31%), Gaps = 4/61 (6%)
Frame = -2
Query: 454 GGXPXPPPXXGXXPPPPPXKXXXP----XXXPPGXSXNFXXXXXXXPXXXXXKXGPXKXX 287
G P PP G PPPPP + P PP + P GP
Sbjct: 315 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP 374
Query: 286 P 284
P
Sbjct: 375 P 375
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 445 PXPPPXXGXXPPPPPXKXXXPXXXPPG 365
P PPP G PPPPP PPG
Sbjct: 297 PPPPPSSGMWPPPPPPPPGR-TPGPPG 322
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 511 PPXPXXXXXXXGXKXGXXXGGXPXPPPXXGXXPPPPP 401
PP P G P PP G PPPPP
Sbjct: 360 PPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/76 (26%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Frame = -2
Query: 445 PXPPPXXGXXPPP-PPXKXXXPXXXPPGXSXNFXXXXXXXPXXXXXKXGPXKXXPXXXFX 269
P PPP PPP PP P PP S + P G P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
Query: 268 XXXXGGXXKXXGXPPP 221
G PPP
Sbjct: 334 RFGPPGMGGMPPPPPP 349
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 456 GGGXXXPPPXXXKXPPPPRXKXXP 385
GGG PPP PPPPR P
Sbjct: 23 GGGKGRPPPARPPPPPPPRGVKCP 46
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/86 (24%), Positives = 21/86 (24%)
Frame = -3
Query: 465 GXXGGGXXXPPPXXXKXPPPPRXKXXPPXXXPRGXPXIXXXXXXXXPGXXXKXGXPKKXX 286
G G PPP P PP P G P PG G P
Sbjct: 202 GPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPGPPG 261
Query: 285 PXXXXGXXPXGXXKXXGGXPPPXXGG 208
P G G PP G
Sbjct: 262 PPGQDGSGGAAQPGPPGPPGPPGNDG 287
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 438 PPPXXXKXPPPPRXKXXPP 382
PPP K PPPP K PP
Sbjct: 175 PPPPTTKAPPPPTTKAPPP 193
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 438 PPPXXXKXPPPPRXKXXPP 382
PPP K PPPP K PP
Sbjct: 183 PPPPTTKAPPPPTTKAPPP 201
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 438 PPPXXXKXPPPPRXKXXPP 382
PPP K PPPP K PP
Sbjct: 191 PPPPTTKAPPPPTTKAPPP 209
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/94 (28%), Positives = 28/94 (29%), Gaps = 4/94 (4%)
Frame = -1
Query: 479 GGKXXGXXGGXXXXPPXXXXKXPPPPXKXXXPPXKXP----GGXPKFXXXGXXXXXGXXX 312
GG G GG PP P P P GG P+ G G
Sbjct: 120 GGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGG 179
Query: 311 KXGXXKKXPPXXFXGKXPGGXXKXXGGPPPXXGG 210
G PP P G GGPPP GG
Sbjct: 180 MGG-----PPGHGGQGGPPGHG-GMGGPPPGQGG 207
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/94 (28%), Positives = 28/94 (29%), Gaps = 4/94 (4%)
Frame = -1
Query: 479 GGKXXGXXGGXXXXPPXXXXKXPPPPXKXXXPPXKXP----GGXPKFXXXGXXXXXGXXX 312
GG G GG PP P P P GG P+ G G
Sbjct: 400 GGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGG 459
Query: 311 KXGXXKKXPPXXFXGKXPGGXXKXXGGPPPXXGG 210
G PP P G GGPPP GG
Sbjct: 460 MGG-----PPGHGGQGGPPGHG-GMGGPPPGQGG 487
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +1
Query: 208 PPPXXGGGPPXXFXXPPGXXPXXXXGGXFFXXPXFXXXPXXXXXP 342
PPP G GPP F PP P GG + P F P P
Sbjct: 323 PPPHFGMGPPRGFMPPP--HPMMFRGGPY--PPFFPPPPPHFMRP 363
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +1
Query: 208 PPPXXGGGPPXXFXXPPGXXPXXXXGGXFFXXPXFXXXPXXXXXP 342
PPP G GPP F PP P GG + P F P P
Sbjct: 323 PPPHFGMGPPRGFMPPP--HPMMFRGGPY--PPFFPPPPPHFMRP 363
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 445 PXPPPXXGXXPPPPPXKXXXPXXXPP 368
P PPP PPPPP + PP
Sbjct: 20 PPPPPSPRRAPPPPPHRKPASLSPPP 45
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 445 PXPPPXXGXXPPPPP 401
P PPP G PPPPP
Sbjct: 41 PPPPPMCGCAPPPPP 55
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 465 GXXGGGXXXPPPXXXKXPPPPRXKXXPPXXXPRGXP 358
G GGG P PPPP PP P P
Sbjct: 25 GGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPPP 60
>AL021173-1|CAE17951.1| 89|Caenorhabditis elegans Hypothetical
protein VK10D6R.1 protein.
Length = 89
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 369 GGFXXGXXXFXGGGGGFXPXXGGGXGXPP 455
GG G GG GG+ P GGG G P
Sbjct: 22 GGMPYGGYGGYGGYGGYPPMYGGGYGYRP 50
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 445 PXPPPXXGXXPPPPP 401
P PPP G PPPPP
Sbjct: 580 PPPPPMLGGPPPPPP 594
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 369 GGFXXGXXXFXGGGGGFXPXXGGGXG 446
GGF G F GGGGG GG G
Sbjct: 64 GGFGGGNGGFGGGGGGNYGGGGGNQG 89
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 439 PPPXXGXXPPPPPXKXXXPXXXPP 368
PPP PPPPP P PP
Sbjct: 57 PPPPMCPPPPPPPPPPMCPPPPPP 80
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 366 PGGFXXGXXXFXGGGGG-FXPXXGGGXG 446
PGG+ G GGGGG F GGG G
Sbjct: 144 PGGYGMGGYGGGGGGGGDFGGYGGGGMG 171
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Frame = -2
Query: 454 GGXPXPP-PXXGXXPPPPPXKXXXPXXXPP 368
GG P PP P PPP P P PP
Sbjct: 120 GGVPAPPNPPRTCCPPPTPAAPPPPPPPPP 149
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 208 PPPXXGGGPPXXFXXPPGXXP 270
PPP GG PP PPG P
Sbjct: 1585 PPPLMGGPPPRLGMPPPGPPP 1605
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 208 PPPXXGGGPPXXFXXPPGXXPXXXXGG 288
PPP GGGPP P P GG
Sbjct: 1482 PPPMRGGGPPMRGGPPMRGGPPMFRGG 1508
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 445 PXPPPXXGXXPPPPPXKXXXPXXXPP 368
P PP PPPPP P PP
Sbjct: 243 PPPPSPVCMPPPPPPCPMPIPCPPPP 268
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 438 PPPXXXKXPPPPRXKXXPPXXXPR 367
PPP PPPP PP PR
Sbjct: 67 PPPICPPPPPPPMPCPPPPPPMPR 90
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 369 GGFXXGXXXFXGGGGGFXPXXGGGXG 446
GGF G F GGGGG GGG G
Sbjct: 64 GGFGGGNGGFGGGGGG---SGGGGGG 86
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 451 GXPXPPPXXGXXPPPPP 401
G P PPP PPPPP
Sbjct: 94 GPPPPPPHYYTQPPPPP 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,183,526
Number of Sequences: 27780
Number of extensions: 245002
Number of successful extensions: 3000
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1916
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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