Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_J20
         (907 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.81 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   0.81 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    25   0.81 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   7.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   7.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   7.6  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 395 VFGQSGAGNNW-AKGHYTEGAELVDSVLDVVRKESESCDCLQGLPT 529
           +  + G  N + A+  Y  G+E   S++ +   +  +C C  G PT
Sbjct: 839 ILAEGGCPNLYDARKPYVNGSEYHPSIVSLGEYKCVTCKCENGKPT 884


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 386 PDGRSVRKVPSGQSPWCRAPSRXRMARGTY 297
           P G +   +PS   PW R+    +  R TY
Sbjct: 220 PPGNTAAALPSPLYPWMRSQFERKRGRQTY 249


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 386 PDGRSVRKVPSGQSPWCRAPSRXRMARGTY 297
           P G +   +PS   PW R+    +  R TY
Sbjct: 222 PPGNTAAALPSPLYPWMRSQFERKRGRQTY 251


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 712  QTKPTASTTRLYTTSASAL 768
            QTK T STT   TT+ S L
Sbjct: 1184 QTKTTTSTTTRPTTTVSQL 1202


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 13/52 (25%), Positives = 22/52 (42%)
 Frame = +3

Query: 291 RQVRAPRHPRSTWSPAPWTLSARDLSDRSSVRTTSFSDSPAPATTGPRDTTQ 446
           +QV  PR P + W      +  R+  D     +   S S   +++   DT+Q
Sbjct: 23  QQVMEPRSPHTAWQFGVSQIVKREPMDEDKNDSGVTSGSDFHSSSPSSDTSQ 74


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 715 TKPTASTTRLYTTSASALSNCP 780
           +K + STT   TT++SAL++ P
Sbjct: 4   SKFSPSTTTTTTTTSSALNSTP 25


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 715 TKPTASTTRLYTTSASALSNCP 780
           +K + STT   TT++SAL++ P
Sbjct: 4   SKFSPSTTTTTTTTSSALNSTP 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,560
Number of Sequences: 336
Number of extensions: 4081
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25237652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)