BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_J20
(907 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 144 6e-35
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 144 6e-35
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 143 1e-34
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 142 3e-34
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 142 3e-34
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 142 3e-34
03_01_0034 + 318432-318825,318902-319851 140 1e-33
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 136 3e-32
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 78 1e-14
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 78 1e-14
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 77 2e-14
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 73 2e-13
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 57 2e-08
02_02_0431 - 10152228-10152352,10152688-10152919,10153602-101538... 37 0.019
10_07_0100 + 12861588-12862601 37 0.025
11_01_0371 - 2821224-2822036,2822162-2822222,2823755-2824158 34 0.18
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 32 0.55
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 32 0.72
10_01_0300 - 3257584-3258825 31 1.3
12_01_0424 - 3346402-3346875 31 1.7
07_01_0834 - 6779017-6779319 31 1.7
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054... 31 1.7
03_05_0547 + 25432079-25432356,25432446-25432522,25432685-254328... 31 1.7
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 30 2.2
09_04_0325 + 16689613-16689772,16690043-16690329 30 2.2
08_02_0235 + 14627648-14628889 30 2.2
07_01_1086 - 9930311-9931993 30 2.2
07_01_0466 - 3518315-3521428 30 2.2
05_03_0216 + 10370531-10371922,10378656-10378808 30 2.2
04_01_0187 - 2153546-2154520,2154581-2155858 30 2.2
02_01_0454 + 3263666-3265375 30 2.2
08_01_0749 + 7063297-7064370 30 2.9
06_01_0886 - 6801333-6802886 29 3.8
10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454 29 5.1
10_04_0010 - 7487455-7489490,7489569-7489980 29 5.1
05_04_0154 - 18549806-18550161,18550271-18550907 29 5.1
03_04_0027 + 16593133-16593573 29 5.1
03_02_1029 - 13488535-13493037 29 5.1
01_06_1818 - 40093327-40093384,40093501-40093580,40093661-400939... 29 5.1
09_06_0081 + 20745627-20748144,20748211-20748308 29 6.7
06_03_1248 + 28685911-28687719 29 6.7
02_05_1214 + 34976814-34979813 29 6.7
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 144 bits (350), Expect = 6e-35
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 503 CDCLQG 520
CDCLQG
Sbjct: 127 CDCLQG 132
Score = 133 bits (322), Expect = 2e-31
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 765 TLKLSTPTYGDL 800
TLKL+TPT+GDL
Sbjct: 214 TLKLATPTFGDL 225
Score = 116 bits (280), Expect = 2e-26
Identities = 50/68 (73%), Positives = 57/68 (83%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYV 303
MR +H+Q GQCGNQ+GAKFW +I DEHG+D TG Y G SDLQLERINVYYNEASGG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 304 PRAILXRL 327
PRA+L L
Sbjct: 61 PRAVLMDL 68
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 144 bits (350), Expect = 6e-35
Identities = 63/66 (95%), Positives = 66/66 (100%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 503 CDCLQG 520
CDCLQG
Sbjct: 127 CDCLQG 132
Score = 133 bits (322), Expect = 2e-31
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 765 TLKLSTPTYGDL 800
TLKL+TPT+GDL
Sbjct: 214 TLKLATPTFGDL 225
Score = 115 bits (277), Expect = 5e-26
Identities = 50/68 (73%), Positives = 57/68 (83%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYV 303
MR +H+Q GQCGNQ+GAKFW +I DEHGID TG Y G SDLQLERINVYYNEASGG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
Query: 304 PRAILXRL 327
PRA+L L
Sbjct: 61 PRAVLMDL 68
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 143 bits (347), Expect = 1e-34
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 503 CDCLQG 520
CDCLQG
Sbjct: 127 CDCLQG 132
Score = 133 bits (322), Expect = 2e-31
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 765 TLKLSTPTYGDL 800
TLKL+TPT+GDL
Sbjct: 214 TLKLATPTFGDL 225
Score = 117 bits (281), Expect = 1e-26
Identities = 51/68 (75%), Positives = 57/68 (83%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYV 303
MR +H+Q GQCGNQ+GAKFW +I DEHGID TG Y G SDLQLERINVYYNEASGG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 304 PRAILXRL 327
PRA+L L
Sbjct: 61 PRAVLMDL 68
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 142 bits (344), Expect = 3e-34
Identities = 61/66 (92%), Positives = 66/66 (100%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 247 DLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 306
Query: 503 CDCLQG 520
CDCLQG
Sbjct: 307 CDCLQG 312
Score = 132 bits (318), Expect = 5e-31
Identities = 60/72 (83%), Positives = 66/72 (91%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 334 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 393
Query: 765 TLKLSTPTYGDL 800
TLKL+TP++GDL
Sbjct: 394 TLKLTTPSFGDL 405
Score = 115 bits (276), Expect = 6e-26
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = +1
Query: 121 KMRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKY 300
KMR +H+Q GQCGNQ+G+KFW ++ DEHGIDPTG Y G SDLQLER+NVYYNEAS G++
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRF 239
Query: 301 VPRAILXRL 327
VPRA+L L
Sbjct: 240 VPRAVLMDL 248
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 142 bits (344), Expect = 3e-34
Identities = 61/66 (92%), Positives = 66/66 (100%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 503 CDCLQG 520
CDCLQG
Sbjct: 127 CDCLQG 132
Score = 132 bits (318), Expect = 5e-31
Identities = 60/72 (83%), Positives = 66/72 (91%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 175 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 234
Query: 765 TLKLSTPTYGDL 800
TLKL+TP++GDL
Sbjct: 235 TLKLTTPSFGDL 246
Score = 114 bits (274), Expect = 1e-25
Identities = 48/68 (70%), Positives = 57/68 (83%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYV 303
MR +H+Q GQCGNQ+GAKFW ++ DEHGIDPTG Y G SDLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60
Query: 304 PRAILXRL 327
PRA+L L
Sbjct: 61 PRAVLMDL 68
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 142 bits (344), Expect = 3e-34
Identities = 61/66 (92%), Positives = 66/66 (100%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 503 CDCLQG 520
CDCLQG
Sbjct: 127 CDCLQG 132
Score = 132 bits (318), Expect = 5e-31
Identities = 60/72 (83%), Positives = 66/72 (91%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 765 TLKLSTPTYGDL 800
TLKL+TP++GDL
Sbjct: 214 TLKLTTPSFGDL 225
Score = 112 bits (270), Expect = 3e-25
Identities = 47/68 (69%), Positives = 57/68 (83%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYV 303
MR +H+Q GQCGNQ+G+KFW ++ DEHGIDPTG Y G SDLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 304 PRAILXRL 327
PRA+L L
Sbjct: 61 PRAVLMDL 68
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 140 bits (339), Expect = 1e-33
Identities = 60/66 (90%), Positives = 65/66 (98%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDSVRSGP+G IFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+
Sbjct: 67 DLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAEN 126
Query: 503 CDCLQG 520
CDCLQG
Sbjct: 127 CDCLQG 132
Score = 132 bits (318), Expect = 5e-31
Identities = 60/72 (83%), Positives = 66/72 (91%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 765 TLKLSTPTYGDL 800
TLKL+TP++GDL
Sbjct: 214 TLKLTTPSFGDL 225
Score = 108 bits (259), Expect = 7e-24
Identities = 46/68 (67%), Positives = 55/68 (80%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYV 303
MR +H+Q GQCGNQ+GAKFW ++ EHGID TG Y G SDLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60
Query: 304 PRAILXRL 327
PRA+L L
Sbjct: 61 PRAVLMDL 68
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 136 bits (328), Expect = 3e-32
Identities = 59/65 (90%), Positives = 63/65 (96%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDS+RSGP G IFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 503 CDCLQ 517
CDCLQ
Sbjct: 127 CDCLQ 131
Score = 130 bits (313), Expect = 2e-30
Identities = 59/72 (81%), Positives = 65/72 (90%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 170 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 229
Query: 765 TLKLSTPTYGDL 800
TLKL+ P++GDL
Sbjct: 230 TLKLTNPSFGDL 241
Score = 108 bits (260), Expect = 5e-24
Identities = 46/68 (67%), Positives = 55/68 (80%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYV 303
MR +H+Q GQCGNQ+GAKFW +I EHG+DPTG Y G S QLERINVY+NEASGG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Query: 304 PRAILXRL 327
PRA+L L
Sbjct: 61 PRAVLMDL 68
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 77.8 bits (183), Expect = 1e-14
Identities = 34/72 (47%), Positives = 50/72 (69%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 765 TLKLSTPTYGDL 800
+L + PTY +L
Sbjct: 216 SLDIERPTYTNL 227
Score = 75.8 bits (178), Expect = 4e-14
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 69 DLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 503 CDCLQG 520
C LQG
Sbjct: 129 CTGLQG 134
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDL--QLERINVYYNEASGGK 297
MR + + GQ G Q+G W L EHGI P G G + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 298 YVPRAILXRL 327
+VPRA+ L
Sbjct: 61 HVPRAVFVDL 70
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 77.8 bits (183), Expect = 1e-14
Identities = 34/72 (47%), Positives = 50/72 (69%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 765 TLKLSTPTYGDL 800
+L + PTY +L
Sbjct: 216 SLDIERPTYTNL 227
Score = 74.5 bits (175), Expect = 1e-13
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 69 DLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 503 CDCLQG 520
C LQG
Sbjct: 129 CTGLQG 134
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDL--QLERINVYYNEASGGK 297
MR + + GQ G Q+G W L EHGI G + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 298 YVPRAILXRL 327
+VPRA+ L
Sbjct: 61 HVPRAVFVDL 70
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 77.0 bits (181), Expect = 2e-14
Identities = 33/72 (45%), Positives = 49/72 (68%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 765 TLKLSTPTYGDL 800
+L + PTY +L
Sbjct: 216 SLDIERPTYTNL 227
Score = 76.6 bits (180), Expect = 3e-14
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++
Sbjct: 69 DLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADN 128
Query: 503 CDCLQG 520
C LQG
Sbjct: 129 CTGLQG 134
Score = 51.2 bits (117), Expect = 1e-06
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQL--ERINVYYNEASGGK 297
MR + + GQ G Q+G W L EHGI+P G + + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 298 YVPRAILXRL 327
+VPRAI L
Sbjct: 61 HVPRAIFVDL 70
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEP +D V++GP+ Q+F P+ + + A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 129 DLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLDRLRKLADN 188
Query: 503 CDCLQG 520
C LQG
Sbjct: 189 CTGLQG 194
Score = 68.9 bits (161), Expect = 5e-12
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +3
Query: 645 KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 800
K+S VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +L
Sbjct: 257 KISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNL 308
Score = 34.7 bits (76), Expect = 0.10
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTG 225
MR + + GQ G Q+G W L EHGI P G
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDG 34
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = +1
Query: 127 RXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYVP 306
R + +Q GQCGNQ+G +FW + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 307 RAILXRLGAR 336
RA+L L R
Sbjct: 63 RALLVDLEPR 72
Score = 55.2 bits (127), Expect = 7e-08
Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKES 496
DLEP ++ +++ + ++ +N + GAGNNWA G Y +G ++VD ++D++ +E+
Sbjct: 68 DLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDMIDREA 126
Query: 497 ESCDCLQG 520
+ D L+G
Sbjct: 127 DGSDSLEG 134
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +3
Query: 588 IREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
+ + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL I
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVE 216
Query: 765 TLKLSTPTY 791
L L+ PT+
Sbjct: 217 RLHLANPTF 225
>02_02_0431 -
10152228-10152352,10152688-10152919,10153602-10153808,
10153915-10154034,10154114-10154260,10155080-10155147,
10155502-10155667,10156765-10156914,10157219-10157335,
10158177-10158281,10159050-10159147,10159594-10159763,
10161489-10161511,10161927-10162006,10162191-10162259,
10163198-10163442,10163614-10163810
Length = 772
Score = 37.1 bits (82), Expect = 0.019
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +1
Query: 475 RCSPQRIRILRLPTGASNLHIPSVAAPGPVWAPSSSQRSVKSTPTES*THTQ*SPRPKYQ 654
RC+P+R R P AS+ PS A PV+AP+ R+++ TP S H + RP ++
Sbjct: 21 RCAPRRHRRALAPRAASSSPSPSTAVAAPVYAPTPRDRALR-TP-HSGYHYDGTARPFFE 78
>10_07_0100 + 12861588-12862601
Length = 337
Score = 36.7 bits (81), Expect = 0.025
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Frame = -3
Query: 578 EEGAHTGPGAATEGMCKLEAPVGNRKILILCGLHRGPSQRAQHPLCS--VPWPSC----- 420
E+ A T PG+A+ C+ A G R +L + G AQ P CS P P+C
Sbjct: 143 EKTAKTKPGSASARACRRPASPGARLASLLNSIFSGKRPSAQRPACSPDYPEPACSTAPP 202
Query: 419 CRRRTVRKRSCPDGRSVRKVPSGQSPWCRAPSRXRMAR 306
+ +R C ++ R P+ + PSR R R
Sbjct: 203 SSSSSYARRPC-HAKTPRTPPTTTTTARARPSRSRTVR 239
>11_01_0371 - 2821224-2822036,2822162-2822222,2823755-2824158
Length = 425
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 369 PKGPERTESMVPGSKSXEDGAGHVLAAGGF 280
P G E+T S + S + DGAGHV GG+
Sbjct: 376 PHGAEQTASFLMTSSNGSDGAGHVAGGGGY 405
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 32.3 bits (70), Expect = 0.55
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 160 GNQLGAKFWXLISDEHG--IDPTGAYHGXSDLQLERIN 267
G+Q +KFW + +E G ++ + AYH +D Q ER+N
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 31.9 bits (69), Expect = 0.72
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 160 GNQLGAKFWXLISDEHG--IDPTGAYHGXSDLQLERIN 267
G+Q +KFW + +E G ++ + AYH +D Q ER+N
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>10_01_0300 - 3257584-3258825
Length = 413
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 160 GNQLGAKFWXLISDEHG--IDPTGAYHGXSDLQLERIN 267
G+Q + FW + +E G ++ + AYH +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDRQTERVN 158
>12_01_0424 - 3346402-3346875
Length = 157
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 472 PRCSPQRIRILRLPTGASNLHIPSVAAPGPVWAP 573
P C+P + L GA+ L + +A P PVWAP
Sbjct: 97 PVCAPNVVVGLPNGFGANGLEVEVLAWPNPVWAP 130
>07_01_0834 - 6779017-6779319
Length = 100
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 765 CGSRCRIEPRCRCSRFRLCFQLAGELR 685
C ++PRCRC RL GELR
Sbjct: 7 CRELAAVQPRCRCEALRLFMDGVGELR 33
>05_04_0028 +
17302359-17302445,17303887-17303952,17305415-17305489,
17305638-17305737,17305819-17305865,17305937-17305994,
17306161-17306210,17306417-17306473,17306561-17306703,
17306793-17306834,17307083-17307124,17308239-17308272,
17308342-17308443,17310373-17310652,17311202-17311332,
17311676-17311773,17312525-17312717
Length = 534
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 300 RAPRHPRSTWSPAPWTLSARDLSD-RSSVRTTSFSDSPAPATTGPRD 437
R+PR ++ S +P +R S RS V+ S S SP PAT+ PR+
Sbjct: 225 RSPRSRSASRSHSPVKERSRSASQSRSPVKERSPSRSPPPATSPPRE 271
>03_05_0547 +
25432079-25432356,25432446-25432522,25432685-25432819,
25433516-25433570,25433696-25433783,25435040-25435138,
25435227-25435358
Length = 287
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +3
Query: 303 APRHPRSTWSPAPWTLSARDLSDR--SSVRTTSFSDSPAPATTGPRDTTQRVLSS 461
APRH R SPA W SAR L R +S R T +P P P V S
Sbjct: 21 APRHGRLLASPAAWR-SARTLPPRAVASSRATVLVSNPPPPPLPPTPAPAAVAPS 74
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 160 GNQLGAKFWXLISDEHG--IDPTGAYHGXSDLQLERIN 267
G+Q + FW + +E G ++ + AYH +D Q ER+N
Sbjct: 289 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 326
>09_04_0325 + 16689613-16689772,16690043-16690329
Length = 148
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/19 (73%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +2
Query: 377 FRPDNFVFGQSGAGN-NWA 430
F PDNFVF QS AG NWA
Sbjct: 129 FNPDNFVFHQSVAGGINWA 147
>08_02_0235 + 14627648-14628889
Length = 413
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 160 GNQLGAKFWXLISDEHG--IDPTGAYHGXSDLQLERIN 267
G+Q + FW + +E G ++ + AYH +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 158
>07_01_1086 - 9930311-9931993
Length = 560
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 160 GNQLGAKFWXLISDEHG--IDPTGAYHGXSDLQLERIN 267
G+Q + FW + +E G ++ + AYH +D Q ER+N
Sbjct: 268 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 305
>07_01_0466 - 3518315-3521428
Length = 1037
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 435 PLAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGSKSXEDGA 307
P A PA P + P+ PE+ E +P + +DGA
Sbjct: 153 PAADPAPAEAAPDAPPADADAAPEAPEKAEEALPAASGGDDGA 195
>05_03_0216 + 10370531-10371922,10378656-10378808
Length = 514
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 160 GNQLGAKFWXLISDEHG--IDPTGAYHGXSDLQLERIN 267
G+Q + FW + +E G ++ + AYH +D Q ER+N
Sbjct: 254 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 291
>04_01_0187 - 2153546-2154520,2154581-2155858
Length = 750
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 160 GNQLGAKFWXLISDEHG--IDPTGAYHGXSDLQLERIN 267
G+Q + FW + +E G ++ + AYH +D Q ER+N
Sbjct: 504 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 541
>02_01_0454 + 3263666-3265375
Length = 569
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = -2
Query: 435 PLAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGSKSXEDGAGHVLAAGGFIVVYIDAL 256
PL QLL +P C T +S R ER + S D V A GG V+ I
Sbjct: 232 PLVQLLDSPSCTSTTVSSR-------ERAAHALRELTSNSDNVWAVCAQGGVTVLLIVCA 284
Query: 255 QLQVRXPMVGT 223
+ R +V +
Sbjct: 285 NVDSRGKLVSS 295
>08_01_0749 + 7063297-7064370
Length = 357
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 160 GNQLGAKFWXLISDEHG--IDPTGAYHGXSDLQLERIN 267
G+Q +KFW + E G ++ + AYH +D Q ER+N
Sbjct: 65 GSQFTSKFWQKLQLEMGTRLNFSTAYHPQTDGQTERVN 102
>06_01_0886 - 6801333-6802886
Length = 517
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Frame = +1
Query: 172 GAKFWXLISDEHGIDPTGAYHGXSDLQLER---INVYYNEASGGKYVPRAILXR--LGA- 333
G KF+ L+ D +GI+P ++ L R ++ Y S + P A++ R LGA
Sbjct: 384 GQKFFYLMKDRYGIEPNARHYSCIVDMLGRAGLLDEAYAIVSNMRCEPSAVVWRTLLGAC 443
Query: 334 RHHGLCPLG 360
R HG LG
Sbjct: 444 RTHGNMTLG 452
>10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454
Length = 674
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 160 GNQLGAKFWXLISDEHG--IDPTGAYHGXSDLQLERIN 267
G+Q + FW + +E G ++ + AYH +D Q ER+N
Sbjct: 406 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 443
>10_04_0010 - 7487455-7489490,7489569-7489980
Length = 815
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 160 GNQLGAKFWXLISDEHG--IDPTGAYHGXSDLQLERIN 267
G+Q + FW + +E G ++ + AYH +D Q ER+N
Sbjct: 568 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 605
>05_04_0154 - 18549806-18550161,18550271-18550907
Length = 330
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +3
Query: 306 PRHPRSTWSPAPWTLSARDLSDRSSVRTTSFSDSPAPATTGPRDTTQRVLSSLTRSS 476
P H RSTW PA + L+ +S TS S PA T R+L S T ++
Sbjct: 137 PTHVRSTWVPAARRRERQQLAGAASSPPTS---SAFPAATTASAKKPRLLGSQTTTT 190
>03_04_0027 + 16593133-16593573
Length = 146
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 393 KLSGRKICPK-GPERTESMVPGSKSXEDGAG 304
KLS R CP ER SMVP K+ E GAG
Sbjct: 63 KLSNRFHCPAVNVERLWSMVPTDKAAEAGAG 93
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 160 GNQLGAKFWXLISDEHG--IDPTGAYHGXSDLQLERIN 267
G+Q + FW + +E G ++ + AYH +D Q ER+N
Sbjct: 1208 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 1245
>01_06_1818 -
40093327-40093384,40093501-40093580,40093661-40093946,
40095007-40095291,40095386-40095513,40095625-40096560,
40096650-40096712,40096801-40096854,40096963-40097139,
40097452-40097583,40097666-40097785,40097935-40098627,
40098760-40099158,40099263-40099271
Length = 1139
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Frame = +3
Query: 348 LSARDLSDRSSV---RTTSFSDSPAPATTGPRDTTQRVLSSLTRSS 476
+ +DLS R S+ R +S +D+P+ + P+D+ QR+++ + RSS
Sbjct: 637 MDVQDLSLRLSIDGERGSSMNDAPS---SDPQDSVQRIMNKIKRSS 679
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 312 HPRSTWSPAPWTLSARDLSDRSSVRTTSFSDSPAPATT-GPRDTT 443
HPR++ +PAP + R + + SFSDS A +++ PR +T
Sbjct: 590 HPRASSAPAPPVAAPRGWTVSPTTARYSFSDSGASSSSAAPRAST 634
>06_03_1248 + 28685911-28687719
Length = 602
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +3
Query: 300 RAPRHPRSTWSPAPWTLSARDLSDRSSVRTTSFSDSPAPATTGPRDTTQRVLSSLTRSSM 479
R P+ST P + + D + RSS S SD P P+ P V SSL SS
Sbjct: 10 RDSARPKSTSGRPPSSPRSSDTTRRSSFTAASSSDKPVPSFLRP-----TVSSSLHSSSS 64
Query: 480 *SAKNQNL 503
S + +L
Sbjct: 65 SSPSSSSL 72
>02_05_1214 + 34976814-34979813
Length = 999
Score = 28.7 bits (61), Expect = 6.7
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2
Query: 545 WRHRVRYGHPPHLK 586
WR+RVR HPPH++
Sbjct: 858 WRYRVRSRHPPHME 871
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,364,507
Number of Sequences: 37544
Number of extensions: 540326
Number of successful extensions: 1834
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1825
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -