Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_J20
(907 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 143 1e-34
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 143 1e-34
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 143 1e-34
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 143 2e-34
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 142 4e-34
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 141 7e-34
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 140 1e-33
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 140 1e-33
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 139 2e-33
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 79 5e-15
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 79 5e-15
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 79 5e-15
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 79 5e-15
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 77 1e-14
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 77 2e-14
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 77 2e-14
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 58 8e-09
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 58 8e-09
At5g20860.1 68418.m02477 pectinesterase family protein contains ... 32 0.45
At3g05510.2 68416.m00604 phospholipid/glycerol acyltransferase f... 29 4.2
At3g05510.1 68416.m00603 phospholipid/glycerol acyltransferase f... 29 4.2
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 4.2
At5g23395.1 68418.m02738 expressed protein 29 5.6
At3g51080.1 68416.m05593 zinc finger (GATA type) family protein ... 29 5.6
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 28 7.4
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 28 7.4
At3g62910.1 68416.m07067 peptide chain release factor, putative ... 28 9.8
At3g59530.2 68416.m06644 strictosidine synthase family protein s... 28 9.8
At3g59530.1 68416.m06643 strictosidine synthase family protein s... 28 9.8
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 143 bits (347), Expect = 1e-34
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 503 CDCLQG 520
CDCLQG
Sbjct: 127 CDCLQG 132
Score = 132 bits (318), Expect = 4e-31
Identities = 60/72 (83%), Positives = 66/72 (91%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 765 TLKLSTPTYGDL 800
TLKL+TP++GDL
Sbjct: 214 TLKLTTPSFGDL 225
Score = 107 bits (257), Expect = 1e-23
Identities = 45/68 (66%), Positives = 55/68 (80%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYV 303
MR +H+Q GQCGNQ+GAKFW ++ EHGID TG Y G +DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 304 PRAILXRL 327
PRA+L L
Sbjct: 61 PRAVLMDL 68
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 143 bits (347), Expect = 1e-34
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 503 CDCLQG 520
CDCLQG
Sbjct: 127 CDCLQG 132
Score = 132 bits (318), Expect = 4e-31
Identities = 60/72 (83%), Positives = 65/72 (90%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 765 TLKLSTPTYGDL 800
TLKL+ PT+GDL
Sbjct: 214 TLKLANPTFGDL 225
Score = 108 bits (260), Expect = 4e-24
Identities = 48/68 (70%), Positives = 55/68 (80%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYV 303
MR +H+Q GQCGNQ+GAKFW +I EHGID TG G +DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 304 PRAILXRL 327
PRA+L L
Sbjct: 61 PRAVLMDL 68
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 143 bits (347), Expect = 1e-34
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 503 CDCLQG 520
CDCLQG
Sbjct: 127 CDCLQG 132
Score = 133 bits (322), Expect = 1e-31
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 765 TLKLSTPTYGDL 800
TLKLSTP++GDL
Sbjct: 214 TLKLSTPSFGDL 225
Score = 106 bits (254), Expect = 2e-23
Identities = 45/68 (66%), Positives = 56/68 (82%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYV 303
MR +H+Q GQCGNQ+G+KFW +++ EHGID TG Y G S+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 304 PRAILXRL 327
PRA+L L
Sbjct: 61 PRAVLMDL 68
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 143 bits (346), Expect = 2e-34
Identities = 61/66 (92%), Positives = 66/66 (100%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+
Sbjct: 68 DLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAEN 127
Query: 503 CDCLQG 520
CDCLQG
Sbjct: 128 CDCLQG 133
Score = 133 bits (321), Expect = 2e-31
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 155 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 214
Query: 765 TLKLSTPTYGDL 800
TLKLSTP++GDL
Sbjct: 215 TLKLSTPSFGDL 226
Score = 110 bits (265), Expect = 1e-24
Identities = 49/69 (71%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHG-XSDLQLERINVYYNEASGGKY 300
MR +H+Q GQCGNQ+G+KFW +I DEHGID TG Y G +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 301 VPRAILXRL 327
VPRA+L L
Sbjct: 61 VPRAVLMDL 69
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 142 bits (343), Expect = 4e-34
Identities = 60/66 (90%), Positives = 66/66 (100%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+
Sbjct: 68 DLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAEN 127
Query: 503 CDCLQG 520
CDCLQG
Sbjct: 128 CDCLQG 133
Score = 133 bits (321), Expect = 2e-31
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 155 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 214
Query: 765 TLKLSTPTYGDL 800
TLKLSTP++GDL
Sbjct: 215 TLKLSTPSFGDL 226
Score = 115 bits (276), Expect = 5e-26
Identities = 50/69 (72%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXS-DLQLERINVYYNEASGGKY 300
MR +H+Q GQCGNQ+G+KFW +I DEHG+DPTG Y+G S DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 301 VPRAILXRL 327
VPRA+L L
Sbjct: 61 VPRAVLMDL 69
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 141 bits (341), Expect = 7e-34
Identities = 60/66 (90%), Positives = 66/66 (100%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+
Sbjct: 67 DLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAEN 126
Query: 503 CDCLQG 520
CDCLQG
Sbjct: 127 CDCLQG 132
Score = 132 bits (318), Expect = 4e-31
Identities = 60/72 (83%), Positives = 66/72 (91%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 765 TLKLSTPTYGDL 800
TLKL+TP++GDL
Sbjct: 214 TLKLTTPSFGDL 225
Score = 114 bits (275), Expect = 7e-26
Identities = 49/68 (72%), Positives = 57/68 (83%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYV 303
MR +H+Q GQCGNQ+G+KFW ++ DEHGIDPTG Y G SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 304 PRAILXRL 327
PRAIL L
Sbjct: 61 PRAILMDL 68
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 140 bits (339), Expect = 1e-33
Identities = 60/66 (90%), Positives = 65/66 (98%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 503 CDCLQG 520
CDCLQG
Sbjct: 127 CDCLQG 132
Score = 132 bits (318), Expect = 4e-31
Identities = 60/72 (83%), Positives = 66/72 (91%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 765 TLKLSTPTYGDL 800
TLKL+TP++GDL
Sbjct: 214 TLKLTTPSFGDL 225
Score = 111 bits (267), Expect = 6e-25
Identities = 48/68 (70%), Positives = 56/68 (82%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYV 303
MR +H+Q GQCGNQ+GAKFW ++ EHGIDPTG Y G SDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 304 PRAILXRL 327
PRA+L L
Sbjct: 61 PRAVLMDL 68
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 140 bits (339), Expect = 1e-33
Identities = 60/66 (90%), Positives = 65/66 (98%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 503 CDCLQG 520
CDCLQG
Sbjct: 127 CDCLQG 132
Score = 132 bits (318), Expect = 4e-31
Identities = 60/72 (83%), Positives = 66/72 (91%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 765 TLKLSTPTYGDL 800
TLKL+TP++GDL
Sbjct: 214 TLKLTTPSFGDL 225
Score = 111 bits (267), Expect = 6e-25
Identities = 48/68 (70%), Positives = 56/68 (82%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYV 303
MR +H+Q GQCGNQ+GAKFW ++ EHGIDPTG Y G SDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 304 PRAILXRL 327
PRA+L L
Sbjct: 61 PRAVLMDL 68
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 139 bits (337), Expect = 2e-33
Identities = 61/66 (92%), Positives = 65/66 (98%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+
Sbjct: 67 DLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Query: 503 CDCLQG 520
DCLQG
Sbjct: 127 SDCLQG 132
Score = 132 bits (318), Expect = 4e-31
Identities = 60/72 (83%), Positives = 65/72 (90%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 765 TLKLSTPTYGDL 800
TLKL+ PT+GDL
Sbjct: 214 TLKLANPTFGDL 225
Score = 111 bits (266), Expect = 8e-25
Identities = 49/68 (72%), Positives = 56/68 (82%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYV 303
MR +H+Q GQCGNQ+GAKFW +I DEHGID TG Y G S LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 304 PRAILXRL 327
PRA+L L
Sbjct: 61 PRAVLMDL 68
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 78.6 bits (185), Expect = 5e-15
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 765 TLKLSTPTYGDL 800
+L + PTY +L
Sbjct: 216 SLNIERPTYTNL 227
Score = 75.8 bits (178), Expect = 4e-14
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 503 CDCLQG 520
C LQG
Sbjct: 129 CTGLQG 134
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDL--QLERINVYYNEASGGK 297
MR + + GQ G Q+G W L EHGI P G G + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 298 YVPRAILXRLGARHHGLCPLGTFR 369
+VPRA+ L GT+R
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYR 84
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 78.6 bits (185), Expect = 5e-15
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 765 TLKLSTPTYGDL 800
+L + PTY +L
Sbjct: 216 SLNIERPTYTNL 227
Score = 75.8 bits (178), Expect = 4e-14
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 503 CDCLQG 520
C LQG
Sbjct: 129 CTGLQG 134
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDL--QLERINVYYNEASGGK 297
MR + + GQ G Q+G W L EHGI P G G + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 298 YVPRAILXRLGARHHGLCPLGTFR 369
+VPRA+ L GT+R
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYR 84
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 78.6 bits (185), Expect = 5e-15
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 765 TLKLSTPTYGDL 800
+L + PTY +L
Sbjct: 216 SLSIERPTYTNL 227
Score = 75.8 bits (178), Expect = 4e-14
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 503 CDCLQG 520
C LQG
Sbjct: 129 CTGLQG 134
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDL--QLERINVYYNEASGGK 297
MR + + GQ G Q+G W L EHGI P G + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 298 YVPRAILXRLGARHHGLCPLGTFR 369
+VPRA+ L GT+R
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYR 84
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 78.6 bits (185), Expect = 5e-15
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 765 TLKLSTPTYGDL 800
+L + PTY +L
Sbjct: 216 SLSIERPTYTNL 227
Score = 75.8 bits (178), Expect = 4e-14
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 503 CDCLQG 520
C LQG
Sbjct: 129 CTGLQG 134
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDL--QLERINVYYNEASGGK 297
MR + + GQ G Q+G W L EHGI P G + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 298 YVPRAILXRLGARHHGLCPLGTFR 369
+VPRA+ L GT+R
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYR 84
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 77.4 bits (182), Expect = 1e-14
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = +3
Query: 624 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 800
+++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +L
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNL 227
Score = 74.9 bits (176), Expect = 7e-14
Identities = 31/66 (46%), Positives = 47/66 (71%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADN 128
Query: 503 CDCLQG 520
C LQG
Sbjct: 129 CTGLQG 134
Score = 51.2 bits (117), Expect = 9e-07
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQL--ERINVYYNEASGGK 297
MR + + GQ G Q+G W L EHGI P G S + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 298 YVPRAILXRLGARHHGLCPLGTFR 369
+VPRA+ L GT+R
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYR 84
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 77.0 bits (181), Expect = 2e-14
Identities = 33/72 (45%), Positives = 49/72 (68%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 765 TLKLSTPTYGDL 800
+L + PTY +L
Sbjct: 216 SLDIERPTYTNL 227
Score = 76.6 bits (180), Expect = 2e-14
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADN 128
Query: 503 CDCLQG 520
C LQG
Sbjct: 129 CTGLQG 134
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQL--ERINVYYNEASGGK 297
MR + + GQ G Q+G W L EHGI P G + + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 298 YVPRAILXRLGARHHGLCPLGTFR 369
+VPRA+ L GT+R
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYR 84
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 77.0 bits (181), Expect = 2e-14
Identities = 33/72 (45%), Positives = 49/72 (68%)
Frame = +3
Query: 585 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 765 TLKLSTPTYGDL 800
+L + PTY +L
Sbjct: 216 SLDIERPTYTNL 227
Score = 76.6 bits (180), Expect = 2e-14
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 502
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADN 128
Query: 503 CDCLQG 520
C LQG
Sbjct: 129 CTGLQG 134
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 124 MRXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQL--ERINVYYNEASGGK 297
MR + + GQ G Q+G W L EHGI P G + + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 298 YVPRAILXRLGARHHGLCPLGTFR 369
+VPRA+ L GT+R
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYR 84
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 58.0 bits (134), Expect = 8e-09
Identities = 27/70 (38%), Positives = 39/70 (55%)
Frame = +1
Query: 127 RXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYVP 306
R + LQ GQCGNQ+G +FW + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 307 RAILXRLGAR 336
RA+L L R
Sbjct: 63 RALLIDLEPR 72
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +3
Query: 588 IREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
+ + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL I
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVE 216
Query: 765 TLKLSTPTY 791
L L+ PT+
Sbjct: 217 RLHLTNPTF 225
Score = 51.6 bits (118), Expect = 7e-07
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKES 496
DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E+
Sbjct: 68 DLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREA 126
Query: 497 ESCDCLQG 520
+ D L+G
Sbjct: 127 DGSDSLEG 134
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 58.0 bits (134), Expect = 8e-09
Identities = 27/70 (38%), Positives = 39/70 (55%)
Frame = +1
Query: 127 RXXVHLQAGQCGNQLGAKFWXLISDEHGIDPTGAYHGXSDLQLERINVYYNEASGGKYVP 306
R + LQ GQCGNQ+G +FW + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 307 RAILXRLGAR 336
RA+L L R
Sbjct: 63 RALLIDLEPR 72
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +3
Query: 588 IREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 764
+ + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL I
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVE 216
Query: 765 TLKLSTPTY 791
L L+ PT+
Sbjct: 217 RLHLTNPTF 225
Score = 51.2 bits (117), Expect = 9e-07
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +2
Query: 323 DLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKES 496
DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E+
Sbjct: 68 DLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREA 126
Query: 497 ESCDCLQG 520
+ D L+G
Sbjct: 127 DGSDSLEG 134
>At5g20860.1 68418.m02477 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 512
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +3
Query: 651 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 782
S+ ++ P ++++ +LV D TY + + ++ D C R +K+ST
Sbjct: 77 SNLLIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCERLMKMST 120
>At3g05510.2 68416.m00604 phospholipid/glycerol acyltransferase
family protein similar to SP|Q16635 Tafazzin from Homo
sapiens; contains Pfam profile: PF01553 Acyltransferase
Length = 358
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -2
Query: 333 GSKSXEDGAGHVLAAGGFIVVYIDALQLQVRXPMVGTGGVDAVLVGDEXPELSSKLVTTL 154
GS+S + G A G + +DA L + P V TG D + VG P + K VT +
Sbjct: 134 GSRSRDGGKTMGSAKRGIGRLILDADTLPMVVPFVHTGMQDIMPVGASVPRI-GKTVTVI 192
Query: 153 AG 148
G
Sbjct: 193 IG 194
>At3g05510.1 68416.m00603 phospholipid/glycerol acyltransferase
family protein similar to SP|Q16635 Tafazzin from Homo
sapiens; contains Pfam profile: PF01553 Acyltransferase
Length = 448
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -2
Query: 333 GSKSXEDGAGHVLAAGGFIVVYIDALQLQVRXPMVGTGGVDAVLVGDEXPELSSKLVTTL 154
GS+S + G A G + +DA L + P V TG D + VG P + K VT +
Sbjct: 224 GSRSRDGGKTMGSAKRGIGRLILDADTLPMVVPFVHTGMQDIMPVGASVPRI-GKTVTVI 282
Query: 153 AG 148
G
Sbjct: 283 IG 284
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 294 QVRAPRHPRSTWSPAPWTLSARDL--SDRSSVRTTSFSDSPAPATTGPRDTTQRVLSSLT 467
QV AP SP+P S+ L SD T S S +P+P ++ +++SSL
Sbjct: 122 QVPAPAPTTKPDSPSPSPSSSPPLPSSDAPGPSTDSISPAPSPTDVNDQNGASKMVSSLV 181
Query: 468 RSSM 479
S+
Sbjct: 182 FGSV 185
>At5g23395.1 68418.m02738 expressed protein
Length = 162
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 366 SDRSSVRTTSFSDSPAPATTGPRDT 440
SD +S+ TT+ +++P P+ PRD+
Sbjct: 6 SDENSIPTTTTTNTPPPSANSPRDS 30
>At3g51080.1 68416.m05593 zinc finger (GATA type) family protein
GATA transcription factor 3 - Arabidopsis thaliana,
PIR:T05288
Length = 312
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 342 WTLSARDLSDRSSVRTTSFSDSPAPAT 422
W+ ++ L+D SS TTS S SP P++
Sbjct: 156 WSHGSQSLTDSSSSSTTSSSSSPRPSS 182
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 434 PWPSCCRRRTVRKRSCPDGRSVRKVPSGQSP 342
PW C + +RK+SCP+ +S +P G+ P
Sbjct: 434 PWE--CAKFFLRKQSCPNFKSFFYLPCGKDP 462
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +2
Query: 458 LVDSVLDVVRKESESCDCLQ 517
+++SV VVRKE+E+C+CLQ
Sbjct: 1 MINSV-GVVRKEAENCNCLQ 19
>At3g62910.1 68416.m07067 peptide chain release factor, putative
similar to peptide chain release factor 1 [Escherichia
coli] GI:147567; contains Pfam profiles PF00472:
Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain
Length = 422
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = -3
Query: 482 LHRGP----SQRAQHPLCSVPWPSCCRRRTVRKRSCPDGRSVRKVPSGQSPW 339
LH P S+++ +C V WP RRT R + +RK+ S + W
Sbjct: 17 LHSSPFTLRSRKSPSGVCLVSWPPSRSRRTRRLVCMAEPYLIRKMESVEKTW 68
>At3g59530.2 68416.m06644 strictosidine synthase family protein
similar to strictosidine synthase [Rauvolfia
serpentina][SP|P15324]
Length = 403
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = +2
Query: 371 QIFRPDNFVFGQSGAG--NNWAKGHYTE--GAELVDSVLDVVRKESESCDCLQGLPTYTF 538
Q+F P++ F G G A G G + VV + C++G+ + T
Sbjct: 81 QVFGPESLEFDSLGRGPYTGLADGRVVRWMGEAIGWETFSVVTSKWSEEACVRGVDSTTN 140
Query: 539 PRWRHRVRYGHPPHLK 586
+W+H G P L+
Sbjct: 141 KQWKHEKLCGRPLGLR 156
>At3g59530.1 68416.m06643 strictosidine synthase family protein
similar to strictosidine synthase [Rauvolfia
serpentina][SP|P15324]
Length = 403
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = +2
Query: 371 QIFRPDNFVFGQSGAG--NNWAKGHYTE--GAELVDSVLDVVRKESESCDCLQGLPTYTF 538
Q+F P++ F G G A G G + VV + C++G+ + T
Sbjct: 81 QVFGPESLEFDSLGRGPYTGLADGRVVRWMGEAIGWETFSVVTSKWSEEACVRGVDSTTN 140
Query: 539 PRWRHRVRYGHPPHLK 586
+W+H G P L+
Sbjct: 141 KQWKHEKLCGRPLGLR 156
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,552,969
Number of Sequences: 28952
Number of extensions: 377133
Number of successful extensions: 1180
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2139598560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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