Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_J19
         (946 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001681-1|AAN71436.1|  168|Drosophila melanogaster RE56164p pro...    35   0.14 
AE014297-4657|AAF57081.1|  159|Drosophila melanogaster CG11314-P...    35   0.14 
AE014134-2985|AAN11014.2|  357|Drosophila melanogaster CG31752-P...    31   1.7  
AY075563-1|AAL68370.1|  134|Drosophila melanogaster RH68460p pro...    31   2.3  
AY071674-1|AAL49296.1|  157|Drosophila melanogaster RH04252p pro...    31   2.3  
AE014297-4659|AAF57082.1|  157|Drosophila melanogaster CG11315-P...    31   2.3  
AE014297-4658|AAN14257.1|  130|Drosophila melanogaster CG11315-P...    31   2.3  

>BT001681-1|AAN71436.1|  168|Drosophila melanogaster RE56164p
           protein.
          Length = 168

 Score = 35.1 bits (77), Expect = 0.14
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = +2

Query: 203 RIXPC---VNSRLCHLKKGXNAXVSFDFTPQFSTTKLKXRPLWVE 328
           R+ PC   +N+  C++++  N+ +SFDFTP F    L     W +
Sbjct: 53  RVSPCPEALNNAACNIRRKHNSEMSFDFTPNFDADTLVASLGWAK 97


>AE014297-4657|AAF57081.1|  159|Drosophila melanogaster CG11314-PA
           protein.
          Length = 159

 Score = 35.1 bits (77), Expect = 0.14
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = +2

Query: 203 RIXPC---VNSRLCHLKKGXNAXVSFDFTPQFSTTKLKXRPLWVE 328
           R+ PC   +N+  C++++  N+ +SFDFTP F    L     W +
Sbjct: 44  RVSPCPEALNNAACNIRRKHNSEMSFDFTPNFDADTLVASLGWAK 88


>AE014134-2985|AAN11014.2|  357|Drosophila melanogaster CG31752-PA
           protein.
          Length = 357

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -1

Query: 334 PXFNPKRPXLELSCGELWCKVERNLRVXPFFEVAQXTVNTGXNSDRVHR 188
           P  N K+P +E SCG+      +N    P  +  Q  V  G N+   HR
Sbjct: 80  PAQNEKKPVIEHSCGDYLLYKNQNYEADPSSKSEQCEVEGGYNNITPHR 128


>AY075563-1|AAL68370.1|  134|Drosophila melanogaster RH68460p
           protein.
          Length = 134

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = +2

Query: 203 RIXPCVNSRL---CHLKKGXNAXVSFDFTPQFSTTKLKXRPLWVE 328
           R+ PC  +     CH+++     +SFDFTP F    L     W +
Sbjct: 42  RVTPCPEANANAACHIRRRHRFTMSFDFTPHFDADTLVASLGWAK 86


>AY071674-1|AAL49296.1|  157|Drosophila melanogaster RH04252p
           protein.
          Length = 157

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = +2

Query: 203 RIXPCVNSRL---CHLKKGXNAXVSFDFTPQFSTTKLKXRPLWVE 328
           R+ PC  +     CH+++     +SFDFTP F    L     W +
Sbjct: 42  RVTPCPEANANAACHIRRRHRFTMSFDFTPHFDADTLVASLGWAK 86



 Score = 29.1 bits (62), Expect = 9.3
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 255 TRRFLSTLHHNSPQLSSXXGLFGLKXGAEIPFDALYNADACTLTSCPTEAGKTQT 419
           T  F  T H ++  L +  G +      E+P   + + +AC  T+CP  +G TQT
Sbjct: 64  TMSFDFTPHFDADTLVASLG-WAKSENVELPLLTM-DQEACKYTTCPVRSGVTQT 116


>AE014297-4659|AAF57082.1|  157|Drosophila melanogaster CG11315-PA,
           isoform A protein.
          Length = 157

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = +2

Query: 203 RIXPCVNSRL---CHLKKGXNAXVSFDFTPQFSTTKLKXRPLWVE 328
           R+ PC  +     CH+++     +SFDFTP F    L     W +
Sbjct: 42  RVTPCPEANANAACHIRRRHRFTMSFDFTPHFDADTLVASLGWAK 86



 Score = 29.1 bits (62), Expect = 9.3
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 255 TRRFLSTLHHNSPQLSSXXGLFGLKXGAEIPFDALYNADACTLTSCPTEAGKTQT 419
           T  F  T H ++  L +  G +      E+P   + + +AC  T+CP  +G TQT
Sbjct: 64  TMSFDFTPHFDADTLVASLG-WAKSENVELPLLTM-DQEACKYTTCPVRSGVTQT 116


>AE014297-4658|AAN14257.1|  130|Drosophila melanogaster CG11315-PB,
           isoform B protein.
          Length = 130

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = +2

Query: 203 RIXPCVNSRL---CHLKKGXNAXVSFDFTPQFSTTKLKXRPLWVE 328
           R+ PC  +     CH+++     +SFDFTP F    L     W +
Sbjct: 42  RVTPCPEANANAACHIRRRHRFTMSFDFTPHFDADTLVASLGWAK 86


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,599,562
Number of Sequences: 53049
Number of extensions: 428226
Number of successful extensions: 1104
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4689737487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)