Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_J19
         (946 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006638-7|AAK85485.2|  491|Caenorhabditis elegans Hypothetical ...    32   0.69 
Z93373-3|CAD54120.1|  449|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z83245-12|CAD54180.1|  449|Caenorhabditis elegans Hypothetical p...    31   1.6  
Z77656-5|CAH04702.1|  308|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>AC006638-7|AAK85485.2|  491|Caenorhabditis elegans Hypothetical
           protein F41G4.5 protein.
          Length = 491

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
 Frame = -1

Query: 319 KRPXLELSCGELWCKVERNLRVXP---FFEVAQXTVNTGXNSDRVHRTRAG---XHXPTE 158
           K P  E    + W KVE+N +V      F+ ++   +    +DR  R R G      PT 
Sbjct: 337 KSPPPETWTQDQWNKVEQNCKVTDEWHIFQESEDATHPNTLTDRAVRYRPGEGTSGAPTL 396

Query: 157 PXGDDVECSETTAEKCSEEQPRGE 86
           P  DD E  E  A   +EE P  E
Sbjct: 397 PPADD-EADEHPAADDAEEPPTVE 419


>Z93373-3|CAD54120.1|  449|Caenorhabditis elegans Hypothetical
           protein ZK131.11b protein.
          Length = 449

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = +3

Query: 84  LSPLGCSSLHFSAVVSLHSTSSPQGSVGXWXPARVLCTRSELXP--VLTVXCATSKKGKT 257
           LS L CSS     + ++ +T+S +GS       ++  T S L P  +L+V    S+ G++
Sbjct: 44  LSRLKCSSPELHHLSTVAATASERGS-------QLTATSSTLGPSTLLSVDKRHSRLGES 96

Query: 258 RRFLSTLHHNSPQLS 302
              LS +HH   QLS
Sbjct: 97  SPNLSRIHHTHTQLS 111


>Z83245-12|CAD54180.1|  449|Caenorhabditis elegans Hypothetical
           protein ZK131.11b protein.
          Length = 449

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = +3

Query: 84  LSPLGCSSLHFSAVVSLHSTSSPQGSVGXWXPARVLCTRSELXP--VLTVXCATSKKGKT 257
           LS L CSS     + ++ +T+S +GS       ++  T S L P  +L+V    S+ G++
Sbjct: 44  LSRLKCSSPELHHLSTVAATASERGS-------QLTATSSTLGPSTLLSVDKRHSRLGES 96

Query: 258 RRFLSTLHHNSPQLS 302
              LS +HH   QLS
Sbjct: 97  SPNLSRIHHTHTQLS 111


>Z77656-5|CAH04702.1|  308|Caenorhabditis elegans Hypothetical
           protein F07B10.6 protein.
          Length = 308

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 457 TGNFEFKWKLWNEDNESQMCCY 522
           +G+F F ++L+N+D  SQ  C+
Sbjct: 59  SGHFVFNYQLFNDDKSSQAACF 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,060,910
Number of Sequences: 27780
Number of extensions: 221599
Number of successful extensions: 528
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)